Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CL1P78423 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.29□□□□□ -1.56
CX3CL1P78423 AC006511.3-201ENST00000624929 1783 ntBASIC5.29□□□□□ -1.56
CX3CL1P78423 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.29□□□□□ -1.56
CX3CL1P78423 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CL1P78423 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CL1P78423 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CL1P78423 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CX3CL1P78423 MTND4P21-201ENST00000453886 1357 ntBASIC5.29□□□□□ -1.56
CX3CL1P78423 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CX3CL1P78423 AC004023.1-201ENST00000561473 1744 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 TTC41P-205ENST00000551270 3963 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CL1P78423 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 OR2M1P-201ENST00000318104 951 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 OR2W4P-201ENST00000406496 926 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.28□□□□□ -1.56
CX3CL1P78423 RN7SKP188-201ENST00000410789 317 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AL356968.2-201ENST00000412769 1257 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC017019.1-201ENST00000426129 261 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CL1P78423 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AL121578.2-201ENST00000448797 447 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC022080.2-201ENST00000452932 533 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AL139156.3-201ENST00000454802 394 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 RN7SL267P-201ENST00000485107 261 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 RN7SL655P-201ENST00000486087 298 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 RN7SL37P-201ENST00000490461 307 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 RN7SL350P-201ENST00000492591 299 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC122714.1-201ENST00000502510 459 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 OR52H2P-201ENST00000514607 902 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 RNA5SP96-201ENST00000516041 107 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 OR8K2P-201ENST00000524645 927 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC084337.1-201ENST00000524809 686 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AP003080.1-202ENST00000526526 915 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 CASP1P2-201ENST00000526830 1258 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AP001804.1-201ENST00000526868 919 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CL1P78423 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.28□□□□□ -1.56
CX3CL1P78423 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC092474.3-201ENST00000603022 568 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC091133.5-201ENST00000603088 301 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AL352984.2-202ENST00000613699 155 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 MIR6070-201ENST00000613967 103 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC007671.1-201ENST00000616957 830 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 AC005393.1-201ENST00000617916 584 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.28□□□□□ -1.56
CX3CL1P78423 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CL1P78423 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CL1P78423 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CL1P78423 AC010132.4-201ENST00000569883 1368 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CL1P78423 ZNF402P-201ENST00000404435 3100 ntBASIC5.28□□□□□ -1.56
CX3CL1P78423 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CX3CL1P78423 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CL1P78423 IMMTP1-201ENST00000435590 2219 ntBASIC5.27□□□□□ -1.57
CX3CL1P78423 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CL1P78423 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms