Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC015524.1-201ENST00000491585 472 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 KHDC1P1-201ENST00000511053 508 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 RN7SKP67-201ENST00000515905 235 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 CASP1P2-201ENST00000526830 1258 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 OR6M2P-201ENST00000529831 871 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 RPA2P3-201ENST00000533268 770 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC037479.1-201ENST00000558361 625 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 MIR3157-201ENST00000578688 85 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 NPIPB1P-202ENST00000588786 828 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 GAPDHP41-201ENST00000613707 975 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AL031658.2-201ENST00000616850 651 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC005899.7-201ENST00000618199 588 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AP001153.1-201ENST00000641024 338 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 SHQ1P1-201ENST00000437111 1544 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AL360271.1-201ENST00000395679 510 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AL360013.1-201ENST00000419031 858 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 EMC3-AS1-205ENST00000438698 534 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC079922.1-201ENST00000443291 359 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 PPIAP32-201ENST00000449940 472 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 MARK2P8-201ENST00000476069 952 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC114728.1-201ENST00000488289 483 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC124891.1-201ENST00000536322 519 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 TDGP1-201ENST00000543961 1229 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC027229.1-201ENST00000583887 253 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC022001.1-201ENST00000605193 268 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 OR7E91P-202ENST00000642062 1198 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.5□□□□□ -1.53
HIST1H3AP68431 AC096921.2-201ENST00000561507 1916 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 IMMTP1-201ENST00000435590 2219 ntBASIC5.5□□□□□ -1.53
HIST1H3AP68431 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HIST1H3AP68431 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.49□□□□□ -1.53
HIST1H3AP68431 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HIST1H3AP68431 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HIST1H3AP68431 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HIST1H3AP68431 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HIST1H3AP68431 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HIST1H3AP68431 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HIST1H3AP68431 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 RPS7P14-201ENST00000426405 583 ntBASIC5.49□□□□□ -1.53
HIST1H3AP68431 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 KATNBL1P2-201ENST00000433311 835 ntBASIC5.49□□□□□ -1.53
HIST1H3AP68431 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HIST1H3AP68431 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.49□□□□□ -1.53
HIST1H3AP68431 RANP2-201ENST00000456833 229 ntBASIC5.49□□□□□ -1.53
HIST1H3AP68431 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms