Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 AL731534.1-201ENST00000434711 269 ntBASIC6.95□□□□□ -1.3
TPM4P67936 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM4P67936 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM4P67936 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM4P67936 RPL5P15-201ENST00000475870 897 ntBASIC6.95□□□□□ -1.3
TPM4P67936 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM4P67936 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.95□□□□□ -1.3
TPM4P67936 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM4P67936 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM4P67936 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM4P67936 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.95□□□□□ -1.3
TPM4P67936 AC009729.1-201ENST00000548873 1133 ntBASIC6.95□□□□□ -1.3
TPM4P67936 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.95□□□□□ -1.3
TPM4P67936 AC015674.1-201ENST00000578482 267 ntBASIC6.95□□□□□ -1.3
TPM4P67936 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM4P67936 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.95□□□□□ -1.3
TPM4P67936 AL589863.1-201ENST00000595383 631 ntBASIC6.95□□□□□ -1.3
TPM4P67936 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM4P67936 AC012175.1-201ENST00000603755 531 ntBASIC6.95□□□□□ -1.3
TPM4P67936 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM4P67936 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.95□□□□□ -1.3
TPM4P67936 RAB28P4-201ENST00000622233 665 ntBASIC6.95□□□□□ -1.3
TPM4P67936 AC005514.1-201ENST00000623521 208 ntBASIC6.95□□□□□ -1.3
TPM4P67936 LINC02495-203ENST00000636704 242 ntBASIC6.95□□□□□ -1.3
TPM4P67936 MAPK10-350ENST00000641777 965 ntBASIC6.95□□□□□ -1.3
TPM4P67936 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 AC023632.6-201ENST00000624338 2177 ntBASIC6.95□□□□□ -1.3
TPM4P67936 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 RPL31P11-201ENST00000426558 1558 ntBASIC6.95□□□□□ -1.3
TPM4P67936 AC010132.4-201ENST00000569883 1368 ntBASIC6.95□□□□□ -1.3
TPM4P67936 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM4P67936 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.94□□□□□ -1.3
TPM4P67936 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM4P67936 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM4P67936 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.94□□□□□ -1.3
TPM4P67936 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
TPM4P67936 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.94□□□□□ -1.3
TPM4P67936 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM4P67936 RNA5SP140-201ENST00000364524 92 ntBASIC6.94□□□□□ -1.3
TPM4P67936 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM4P67936 AL121977.1-201ENST00000401636 979 ntBASIC6.94□□□□□ -1.3
TPM4P67936 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TPM4P67936 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.94□□□□□ -1.3
TPM4P67936 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.94□□□□□ -1.3
TPM4P67936 GRPEL2P2-201ENST00000421856 670 ntBASIC6.94□□□□□ -1.3
TPM4P67936 OR52S1P-201ENST00000427016 937 ntBASIC6.94□□□□□ -1.3
TPM4P67936 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM4P67936 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM4P67936 AC016908.1-201ENST00000442571 1219 ntBASIC6.94□□□□□ -1.3
TPM4P67936 RPL5P10-201ENST00000445207 894 ntBASIC6.94□□□□□ -1.3
TPM4P67936 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM4P67936 AC108751.3-201ENST00000461814 1020 ntBASIC6.94□□□□□ -1.3
TPM4P67936 RN7SL352P-201ENST00000466002 277 ntBASIC6.94□□□□□ -1.3
TPM4P67936 OR6M2P-201ENST00000529831 871 ntBASIC6.94□□□□□ -1.3
TPM4P67936 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM4P67936 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.94□□□□□ -1.3
TPM4P67936 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.94□□□□□ -1.3
TPM4P67936 TPRX1P1-201ENST00000557620 319 ntBASIC6.94□□□□□ -1.3
TPM4P67936 AC027229.1-201ENST00000583887 253 ntBASIC6.94□□□□□ -1.3
TPM4P67936 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.94□□□□□ -1.3
TPM4P67936 AC004805.3-201ENST00000603178 310 ntBASIC6.94□□□□□ -1.3
TPM4P67936 AC007347.2-201ENST00000623044 180 ntBASIC6.94□□□□□ -1.3
TPM4P67936 AL109924.4-201ENST00000623089 670 ntBASIC6.94□□□□□ -1.3
TPM4P67936 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
TPM4P67936 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
TPM4P67936 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.94□□□□□ -1.3
TPM4P67936 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TPM4P67936 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
TPM4P67936 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TPM4P67936 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TPM4P67936 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
TPM4P67936 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM4P67936 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TPM4P67936 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM4P67936 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TPM4P67936 EEF1GP6-201ENST00000402309 905 ntBASIC6.93□□□□□ -1.3
TPM4P67936 RPL5P2-201ENST00000429598 854 ntBASIC6.93□□□□□ -1.3
TPM4P67936 FECHP1-201ENST00000431896 1214 ntBASIC6.93□□□□□ -1.3
TPM4P67936 AC083855.1-201ENST00000440041 258 ntBASIC6.93□□□□□ -1.3
TPM4P67936 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM4P67936 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.93□□□□□ -1.3
TPM4P67936 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.93□□□□□ -1.3
TPM4P67936 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.93□□□□□ -1.3
TPM4P67936 RPL10P7-201ENST00000495649 625 ntBASIC6.93□□□□□ -1.3
TPM4P67936 AC114940.1-201ENST00000512162 1265 ntBASIC6.93□□□□□ -1.3
TPM4P67936 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TPM4P67936 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM4P67936 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.93□□□□□ -1.3
TPM4P67936 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM4P67936 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.93□□□□□ -1.3
TPM4P67936 SYPL1P2-201ENST00000582878 727 ntBASIC6.93□□□□□ -1.3
TPM4P67936 AC020916.2-201ENST00000591242 360 ntBASIC6.93□□□□□ -1.3
TPM4P67936 AC114477.1-201ENST00000605097 605 ntBASIC6.93□□□□□ -1.3
TPM4P67936 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.93□□□□□ -1.3
TPM4P67936 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
TPM4P67936 AC009120.7-201ENST00000623452 780 ntBASIC6.93□□□□□ -1.3
TPM4P67936 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms