Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 SNORD8-201ENST00000363915 110 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SEC61A1P61619 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AL353133.1-201ENST00000407695 401 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 MIR1266-201ENST00000408125 84 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 AC021876.1-201ENST00000425959 359 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 AP003385.1-201ENST00000426387 893 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 E2F6P3-201ENST00000441743 743 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 GXYLT1P1-201ENST00000446657 490 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AL139156.3-201ENST00000454802 394 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 MTCYBP14-201ENST00000457471 715 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 AC083806.1-201ENST00000468934 316 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 RPS4XP17-201ENST00000479057 754 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AP005902.2-201ENST00000518393 307 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A1P61619 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 RPAP2P1-201ENST00000603626 1168 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 AC097467.4-201ENST00000605504 141 ntBASIC5.72□□□□□ -1.49
SEC61A1P61619 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A1P61619 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A1P61619 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SEC61A1P61619 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SEC61A1P61619 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A1P61619 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.71□□□□□ -1.49
SEC61A1P61619 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
SEC61A1P61619 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SEC61A1P61619 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SEC61A1P61619 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.71□□□□□ -1.49
SEC61A1P61619 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.71□□□□□ -1.49
SEC61A1P61619 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.49
SEC61A1P61619 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SEC61A1P61619 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SEC61A1P61619 TRAV35-201ENST00000390462 330 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 AL360271.1-201ENST00000395679 510 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 GABARAPL3-201ENST00000412799 354 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 RPLP1P10-201ENST00000413972 339 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A1P61619 ETF1P1-206ENST00000427296 984 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 LDHAP2-201ENST00000437325 985 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 NMNAT1P3-201ENST00000457517 888 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 RN7SKP198-201ENST00000459286 306 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 RPS3AP49-201ENST00000472161 790 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A1P61619 PPP1R11P1-201ENST00000486095 376 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 RPL5P33-201ENST00000487833 905 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A1P61619 RN7SL612P-201ENST00000497704 295 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC093878.1-201ENST00000515630 432 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms