Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH13P55290 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.18□□□□□ -1.42
CDH13P55290 RNU1-5P-201ENST00000362684 144 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AC092634.1-201ENST00000366505 199 ntBASIC6.18□□□□□ -1.42
CDH13P55290 RN7SKP205-201ENST00000410999 307 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AC006509.1-201ENST00000420788 634 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AC007562.1-201ENST00000421819 517 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH13P55290 AL589794.1-201ENST00000424971 390 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AC083862.1-201ENST00000427378 1242 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH13P55290 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH13P55290 COL11A2P1-205ENST00000441798 676 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH13P55290 OR13K1P-201ENST00000444577 975 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AC023274.2-201ENST00000445264 521 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH13P55290 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH13P55290 SLAMF6P1-201ENST00000451067 602 ntBASIC6.18□□□□□ -1.42
CDH13P55290 RPS27AP3-201ENST00000453803 454 ntBASIC6.18□□□□□ -1.42
CDH13P55290 TREML3P-201ENST00000457327 501 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AC009567.2-201ENST00000502989 349 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CDH13P55290 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH13P55290 RN7SKP67-201ENST00000515905 235 ntBASIC6.18□□□□□ -1.42
CDH13P55290 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH13P55290 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.18□□□□□ -1.42
CDH13P55290 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CDH13P55290 MIR3189-201ENST00000578735 73 ntBASIC6.18□□□□□ -1.42
CDH13P55290 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 AC012175.1-201ENST00000603755 531 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AL021368.3-201ENST00000607119 578 ntBASIC6.18□□□□□ -1.42
CDH13P55290 AC107905.1-201ENST00000616204 426 ntBASIC6.18□□□□□ -1.42
CDH13P55290 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 SHQ1P1-201ENST00000437111 1544 ntBASIC6.18□□□□□ -1.42
CDH13P55290 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH13P55290 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH13P55290 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH13P55290 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH13P55290 AC022306.1-201ENST00000560489 1562 ntBASIC6.18□□□□□ -1.42
CDH13P55290 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH13P55290 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH13P55290 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH13P55290 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 TTC41P-205ENST00000551270 3963 ntBASIC6.17□□□□□ -1.42
CDH13P55290 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 MTCO1P8-201ENST00000416914 1523 ntBASIC6.17□□□□□ -1.42
CDH13P55290 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 SNORD16-201ENST00000362803 99 ntBASIC6.17□□□□□ -1.42
CDH13P55290 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH13P55290 AC026310.1-201ENST00000396004 378 ntBASIC6.17□□□□□ -1.42
CDH13P55290 OR2W4P-201ENST00000406496 926 ntBASIC6.17□□□□□ -1.42
CDH13P55290 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.17□□□□□ -1.42
CDH13P55290 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.17□□□□□ -1.42
CDH13P55290 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.17□□□□□ -1.42
CDH13P55290 YY1P1-201ENST00000427625 668 ntBASIC6.17□□□□□ -1.42
CDH13P55290 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH13P55290 BMS1P11-201ENST00000442351 885 ntBASIC6.17□□□□□ -1.42
CDH13P55290 AL451063.1-201ENST00000450164 1133 ntBASIC6.17□□□□□ -1.42
CDH13P55290 OR52Y1P-201ENST00000452418 828 ntBASIC6.17□□□□□ -1.42
CDH13P55290 RPL36AP55-201ENST00000454114 305 ntBASIC6.17□□□□□ -1.42
CDH13P55290 VPS25P1-201ENST00000455691 508 ntBASIC6.17□□□□□ -1.42
CDH13P55290 BMS1P9-201ENST00000457640 885 ntBASIC6.17□□□□□ -1.42
CDH13P55290 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH13P55290 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 AC093664.1-201ENST00000511779 289 ntBASIC6.17□□□□□ -1.42
CDH13P55290 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.17□□□□□ -1.42
CDH13P55290 RNA5SP75-201ENST00000516841 111 ntBASIC6.17□□□□□ -1.42
CDH13P55290 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
CDH13P55290 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH13P55290 AL589863.1-201ENST00000595383 631 ntBASIC6.17□□□□□ -1.42
CDH13P55290 AL512430.4-201ENST00000603085 613 ntBASIC6.17□□□□□ -1.42
CDH13P55290 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 AC027506.1-201ENST00000621395 198 ntBASIC6.17□□□□□ -1.42
CDH13P55290 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH13P55290 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH13P55290 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms