Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH12P55289 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH12P55289 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.97□□□□□ -1.45
CDH12P55289 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 TRAV35-201ENST00000390462 330 ntBASIC5.97□□□□□ -1.45
CDH12P55289 U3.43-201ENST00000410734 213 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC017035.1-201ENST00000411999 1115 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 AL359092.1-201ENST00000417156 265 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AL929472.1-201ENST00000417484 429 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 AC007064.3-201ENST00000422608 359 ntBASIC5.97□□□□□ -1.45
CDH12P55289 CR848007.2-201ENST00000424918 787 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AHCYP8-201ENST00000425108 209 ntBASIC5.97□□□□□ -1.45
CDH12P55289 SEPT14P12-201ENST00000442280 560 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH12P55289 RN7SL37P-201ENST00000490461 307 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC022206.1-201ENST00000495947 347 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH12P55289 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH12P55289 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.97□□□□□ -1.45
CDH12P55289 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH12P55289 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.97□□□□□ -1.45
CDH12P55289 MIR3159-201ENST00000584572 74 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC090241.1-201ENST00000587732 621 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 AC245052.7-201ENST00000601161 359 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AL391001.1-201ENST00000602747 715 ntBASIC5.97□□□□□ -1.45
CDH12P55289 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC023206.1-201ENST00000605824 298 ntBASIC5.97□□□□□ -1.45
CDH12P55289 FO681491.1-202ENST00000623392 737 ntBASIC5.97□□□□□ -1.45
CDH12P55289 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH12P55289 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 BIN2P1-201ENST00000504996 1530 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AC009135.2-201ENST00000624136 1768 ntBASIC5.97□□□□□ -1.45
CDH12P55289 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CDH12P55289 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH12P55289 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH12P55289 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
CDH12P55289 AKAP17BP-201ENST00000431706 2719 ntBASIC5.97□□□□□ -1.45
CDH12P55289 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 AL449283.1-201ENST00000602631 3403 ntBASIC5.96□□□□□ -1.45
CDH12P55289 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CDH12P55289 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.96□□□□□ -1.45
CDH12P55289 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CDH12P55289 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH12P55289 SHQ1P1-201ENST00000437111 1544 ntBASIC5.96□□□□□ -1.46
CDH12P55289 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDH12P55289 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDH12P55289 RNA5SP382-201ENST00000363355 112 ntBASIC5.96□□□□□ -1.46
CDH12P55289 RN7SKP191-201ENST00000364713 306 ntBASIC5.96□□□□□ -1.46
CDH12P55289 OR1F12-201ENST00000402365 945 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AL139100.1-201ENST00000408001 498 ntBASIC5.96□□□□□ -1.46
CDH12P55289 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH12P55289 RPL23AP18-201ENST00000416139 468 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH12P55289 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 RPL3P11-201ENST00000434028 1146 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AC013410.1-201ENST00000436223 1232 ntBASIC5.96□□□□□ -1.46
CDH12P55289 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.96□□□□□ -1.46
CDH12P55289 GAPDHP33-201ENST00000443168 1013 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AL845321.1-201ENST00000444603 348 ntBASIC5.96□□□□□ -1.46
CDH12P55289 RPS15AP29-201ENST00000445539 400 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AL121578.2-201ENST00000448797 447 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.96□□□□□ -1.46
CDH12P55289 OR6C72P-201ENST00000451403 892 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH12P55289 RN7SL104P-201ENST00000498686 293 ntBASIC5.96□□□□□ -1.46
CDH12P55289 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDH12P55289 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH12P55289 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH12P55289 MTND4LP25-201ENST00000570218 163 ntBASIC5.96□□□□□ -1.46
CDH12P55289 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH12P55289 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 MIR378H-201ENST00000579966 83 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms