Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
LIMK2P53671 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK2P53671 SMG1P5-202ENST00000529428 4219 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 SMG1P2-201ENST00000566127 4221 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK2P53671 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
LIMK2P53671 MRPS6P2-201ENST00000381143 370 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
LIMK2P53671 AL360271.1-201ENST00000395679 510 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 SNORA11.3-201ENST00000408471 128 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 OR13K1P-201ENST00000444577 975 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.4□□□□□ -1.38
LIMK2P53671 AC092967.1-201ENST00000449016 481 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 AC068491.1-201ENST00000449539 1241 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.4□□□□□ -1.38
LIMK2P53671 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 AC103563.5-201ENST00000455643 364 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 AC005017.1-201ENST00000482002 490 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.4□□□□□ -1.38
LIMK2P53671 HMGN1P16-201ENST00000508308 283 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.4□□□□□ -1.38
LIMK2P53671 SNORA74.1-201ENST00000516320 180 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 COX6B1P4-201ENST00000519826 484 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.4□□□□□ -1.38
LIMK2P53671 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.4□□□□□ -1.38
LIMK2P53671 OR4A40P-201ENST00000533878 948 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 RPL41P2-201ENST00000544920 409 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.4□□□□□ -1.38
LIMK2P53671 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.4□□□□□ -1.38
LIMK2P53671 OR4H6P-201ENST00000563771 921 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 SYPL1P2-201ENST00000582878 727 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 OR7A8P-201ENST00000595427 913 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 AL589765.6-201ENST00000601909 549 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LIMK2P53671 SNORA11.6-201ENST00000619030 128 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 AC022726.2-201ENST00000634673 547 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 AC111152.1-202ENST00000635848 339 ntBASIC6.4□□□□□ -1.38
LIMK2P53671 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LIMK2P53671 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.4□□□□□ -1.39
LIMK2P53671 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.4□□□□□ -1.39
LIMK2P53671 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LIMK2P53671 NR1H5P-201ENST00000452683 1377 ntBASIC6.4□□□□□ -1.39
LIMK2P53671 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
LIMK2P53671 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.4□□□□□ -1.39
LIMK2P53671 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.4□□□□□ -1.39
LIMK2P53671 AC005225.5-201ENST00000623547 2225 ntBASIC6.4□□□□□ -1.39
LIMK2P53671 AP000641.1-201ENST00000531988 1639 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LIMK2P53671 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.39□□□□□ -1.39
LIMK2P53671 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.39□□□□□ -1.39
LIMK2P53671 RNA5SP478-201ENST00000364657 115 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LIMK2P53671 RPSAP41-201ENST00000439695 860 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 RPSAP40-201ENST00000442343 891 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 AL020997.1-201ENST00000446554 349 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 RBMY2BP-202ENST00000451071 1156 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.39□□□□□ -1.39
LIMK2P53671 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK2P53671 AC113367.2-201ENST00000505749 160 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 AC106800.3-201ENST00000511389 308 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 RN7SKP248-201ENST00000516278 305 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK2P53671 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.39□□□□□ -1.39
LIMK2P53671 AC090888.3-201ENST00000558917 509 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK2P53671 OR1E3-201ENST00000575608 948 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK2P53671 AC090616.1-201ENST00000583895 447 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.39□□□□□ -1.39
LIMK2P53671 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK2P53671 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.39□□□□□ -1.39
LIMK2P53671 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.39□□□□□ -1.39
LIMK2P53671 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK2P53671 AP003789.1-201ENST00000617737 605 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.39□□□□□ -1.39
LIMK2P53671 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.39□□□□□ -1.39
LIMK2P53671 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 SHQ1P1-201ENST00000437111 1544 ntBASIC6.39□□□□□ -1.39
LIMK2P53671 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LIMK2P53671 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.38□□□□□ -1.39
LIMK2P53671 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK2P53671 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK2P53671 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIMK2P53671 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
LIMK2P53671 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms