Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPS15AP30-201ENST00000420976 390 ntBASIC7.59□□□□□ -1.19
NUP98P52948 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.59□□□□□ -1.19
NUP98P52948 RPS27AP3-201ENST00000453803 454 ntBASIC7.59□□□□□ -1.19
NUP98P52948 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.59□□□□□ -1.19
NUP98P52948 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NUP98P52948 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.59□□□□□ -1.19
NUP98P52948 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.59□□□□□ -1.19
NUP98P52948 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.59□□□□□ -1.19
NUP98P52948 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NUP98P52948 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.59□□□□□ -1.19
NUP98P52948 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.59□□□□□ -1.19
NUP98P52948 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.59□□□□□ -1.19
NUP98P52948 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NUP98P52948 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 FBXL21-201ENST00000297158 1305 ntBASIC7.59□□□□□ -1.19
NUP98P52948 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.59□□□□□ -1.19
NUP98P52948 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.59□□□□□ -1.19
NUP98P52948 AP002833.3-201ENST00000625075 2265 ntBASIC7.59□□□□□ -1.19
NUP98P52948 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
NUP98P52948 RNA5SP234-201ENST00000363916 119 ntBASIC7.59□□□□□ -1.19
NUP98P52948 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.59□□□□□ -1.19
NUP98P52948 EEF1B2P6-201ENST00000445713 673 ntBASIC7.59□□□□□ -1.19
NUP98P52948 AC104164.1-201ENST00000460282 590 ntBASIC7.59□□□□□ -1.19
NUP98P52948 AL122020.1-201ENST00000472287 459 ntBASIC7.59□□□□□ -1.19
NUP98P52948 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.59□□□□□ -1.19
NUP98P52948 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.59□□□□□ -1.19
NUP98P52948 AC013244.1-201ENST00000604279 193 ntBASIC7.59□□□□□ -1.19
NUP98P52948 AL021918.2-201ENST00000613415 194 ntBASIC7.59□□□□□ -1.19
NUP98P52948 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NUP98P52948 AL359091.1-201ENST00000449048 1734 ntBASIC7.59□□□□□ -1.2
NUP98P52948 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
NUP98P52948 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
NUP98P52948 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.58□□□□□ -1.2
NUP98P52948 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 AC004014.2-201ENST00000623718 5122 ntBASIC7.58□□□□□ -1.2
NUP98P52948 AL161901.1-201ENST00000624954 3425 ntBASIC7.58□□□□□ -1.2
NUP98P52948 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.58□□□□□ -1.2
NUP98P52948 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 AL451136.1-201ENST00000435399 325 ntBASIC7.58□□□□□ -1.2
NUP98P52948 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.58□□□□□ -1.2
NUP98P52948 GAPDHP71-201ENST00000511530 1003 ntBASIC7.58□□□□□ -1.2
NUP98P52948 RN7SKP288-201ENST00000516227 268 ntBASIC7.58□□□□□ -1.2
NUP98P52948 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.58□□□□□ -1.2
NUP98P52948 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.58□□□□□ -1.2
NUP98P52948 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.58□□□□□ -1.2
NUP98P52948 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.58□□□□□ -1.2
NUP98P52948 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 MIR4489-201ENST00000578869 62 ntBASIC7.58□□□□□ -1.2
NUP98P52948 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.58□□□□□ -1.2
NUP98P52948 RN7SL787P-201ENST00000613000 284 ntBASIC7.58□□□□□ -1.2
NUP98P52948 TCL6_3.1-201ENST00000619064 137 ntBASIC7.58□□□□□ -1.2
NUP98P52948 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NUP98P52948 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.58□□□□□ -1.2
NUP98P52948 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NUP98P52948 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
NUP98P52948 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NUP98P52948 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
NUP98P52948 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
NUP98P52948 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NUP98P52948 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
NUP98P52948 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.57□□□□□ -1.2
NUP98P52948 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
NUP98P52948 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
NUP98P52948 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NUP98P52948 RN7SKP166-201ENST00000410812 305 ntBASIC7.57□□□□□ -1.2
NUP98P52948 AK4P4-201ENST00000419465 646 ntBASIC7.57□□□□□ -1.2
NUP98P52948 AC114728.1-201ENST00000488289 483 ntBASIC7.57□□□□□ -1.2
NUP98P52948 HMGN2P36-201ENST00000529541 409 ntBASIC7.57□□□□□ -1.2
NUP98P52948 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NUP98P52948 OR7E18P-201ENST00000592589 702 ntBASIC7.57□□□□□ -1.2
NUP98P52948 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NUP98P52948 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.57□□□□□ -1.2
NUP98P52948 AC127024.6-201ENST00000621598 424 ntBASIC7.57□□□□□ -1.2
NUP98P52948 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
NUP98P52948 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
NUP98P52948 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.57□□□□□ -1.2
NUP98P52948 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
NUP98P52948 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NUP98P52948 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.57□□□□□ -1.2
NUP98P52948 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
NUP98P52948 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms