Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.57□□□□□ -1.36
HADHAP40939 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.57□□□□□ -1.36
HADHAP40939 AC021146.10-201ENST00000515628 706 ntBASIC6.57□□□□□ -1.36
HADHAP40939 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.57□□□□□ -1.36
HADHAP40939 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.57□□□□□ -1.36
HADHAP40939 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.57□□□□□ -1.36
HADHAP40939 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.57□□□□□ -1.36
HADHAP40939 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.57□□□□□ -1.36
HADHAP40939 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.57□□□□□ -1.36
HADHAP40939 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.57□□□□□ -1.36
HADHAP40939 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.57□□□□□ -1.36
HADHAP40939 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.57□□□□□ -1.36
HADHAP40939 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HADHAP40939 RN7SL66P-201ENST00000582099 264 ntBASIC6.57□□□□□ -1.36
HADHAP40939 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.57□□□□□ -1.36
HADHAP40939 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HADHAP40939 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HADHAP40939 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.57□□□□□ -1.36
HADHAP40939 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HADHAP40939 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HADHAP40939 AC110373.1-201ENST00000505994 3505 ntBASIC6.56□□□□□ -1.36
HADHAP40939 AC011455.2-201ENST00000599320 3336 ntBASIC6.56□□□□□ -1.36
HADHAP40939 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.56□□□□□ -1.36
HADHAP40939 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
HADHAP40939 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
HADHAP40939 AC023245.2-201ENST00000530760 2978 ntBASIC6.56□□□□□ -1.36
HADHAP40939 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.56□□□□□ -1.36
HADHAP40939 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
HADHAP40939 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
HADHAP40939 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HADHAP40939 PPIAP24-201ENST00000328558 471 ntBASIC6.56□□□□□ -1.36
HADHAP40939 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
HADHAP40939 OR11H13P-201ENST00000359695 979 ntBASIC6.56□□□□□ -1.36
HADHAP40939 MRPS6P2-201ENST00000381143 370 ntBASIC6.56□□□□□ -1.36
HADHAP40939 RNU4-64P-201ENST00000410795 131 ntBASIC6.56□□□□□ -1.36
HADHAP40939 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.56□□□□□ -1.36
HADHAP40939 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.56□□□□□ -1.36
HADHAP40939 AC007568.1-201ENST00000422912 471 ntBASIC6.56□□□□□ -1.36
HADHAP40939 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.56□□□□□ -1.36
HADHAP40939 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.56□□□□□ -1.36
HADHAP40939 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.56□□□□□ -1.36
HADHAP40939 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 TRBV8-1-201ENST00000481590 279 ntBASIC6.56□□□□□ -1.36
HADHAP40939 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.56□□□□□ -1.36
HADHAP40939 AC009567.2-201ENST00000502989 349 ntBASIC6.56□□□□□ -1.36
HADHAP40939 AC138409.2-202ENST00000507274 458 ntBASIC6.56□□□□□ -1.36
HADHAP40939 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.56□□□□□ -1.36
HADHAP40939 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.56□□□□□ -1.36
HADHAP40939 AC147055.1-201ENST00000509261 750 ntBASIC6.56□□□□□ -1.36
HADHAP40939 NACAP5-201ENST00000509863 636 ntBASIC6.56□□□□□ -1.36
HADHAP40939 SCARNA5-201ENST00000516201 276 ntBASIC6.56□□□□□ -1.36
HADHAP40939 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.56□□□□□ -1.36
HADHAP40939 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.56□□□□□ -1.36
HADHAP40939 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.56□□□□□ -1.36
HADHAP40939 OR4C49P-201ENST00000563891 900 ntBASIC6.56□□□□□ -1.36
HADHAP40939 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.56□□□□□ -1.36
HADHAP40939 AC036176.3-201ENST00000602456 418 ntBASIC6.56□□□□□ -1.36
HADHAP40939 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.56□□□□□ -1.36
HADHAP40939 U1.41-201ENST00000617626 165 ntBASIC6.56□□□□□ -1.36
HADHAP40939 AP001264.1-201ENST00000620602 703 ntBASIC6.56□□□□□ -1.36
HADHAP40939 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 MTCO1P1-201ENST00000624263 1081 ntBASIC6.56□□□□□ -1.36
HADHAP40939 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.56□□□□□ -1.36
HADHAP40939 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.56□□□□□ -1.36
HADHAP40939 AL132640.3-201ENST00000630473 177 ntBASIC6.56□□□□□ -1.36
HADHAP40939 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.56□□□□□ -1.36
HADHAP40939 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.56□□□□□ -1.36
HADHAP40939 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 TMCC1P1-201ENST00000518897 1980 ntBASIC6.56□□□□□ -1.36
HADHAP40939 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.56□□□□□ -1.36
HADHAP40939 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HADHAP40939 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HADHAP40939 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.56□□□□□ -1.36
HADHAP40939 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HADHAP40939 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 NAMPTP1-201ENST00000440465 2514 ntBASIC6.55□□□□□ -1.36
HADHAP40939 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HADHAP40939 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.55□□□□□ -1.36
HADHAP40939 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.55□□□□□ -1.36
HADHAP40939 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms