Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 SMG1P5-202ENST00000529428 4219 ntBASIC5.78□□□□□ -1.48
SHC1P29353 SMG1P2-201ENST00000566127 4221 ntBASIC5.78□□□□□ -1.48
SHC1P29353 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHC1P29353 RPL11P4-201ENST00000332269 436 ntBASIC5.78□□□□□ -1.48
SHC1P29353 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 YWHAZP4-201ENST00000392459 708 ntBASIC5.78□□□□□ -1.48
SHC1P29353 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHC1P29353 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.78□□□□□ -1.48
SHC1P29353 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.78□□□□□ -1.48
SHC1P29353 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.78□□□□□ -1.48
SHC1P29353 RPL9P15-201ENST00000491096 532 ntBASIC5.78□□□□□ -1.48
SHC1P29353 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.78□□□□□ -1.48
SHC1P29353 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.78□□□□□ -1.48
SHC1P29353 RN7SKP67-201ENST00000515905 235 ntBASIC5.78□□□□□ -1.48
SHC1P29353 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.78□□□□□ -1.48
SHC1P29353 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.78□□□□□ -1.48
SHC1P29353 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.78□□□□□ -1.48
SHC1P29353 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 BMS1P16-201ENST00000556075 1147 ntBASIC5.78□□□□□ -1.48
SHC1P29353 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.78□□□□□ -1.48
SHC1P29353 AC090616.1-201ENST00000583895 447 ntBASIC5.78□□□□□ -1.48
SHC1P29353 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.78□□□□□ -1.48
SHC1P29353 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.78□□□□□ -1.48
SHC1P29353 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHC1P29353 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SHC1P29353 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHC1P29353 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.77□□□□□ -1.49
SHC1P29353 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.77□□□□□ -1.49
SHC1P29353 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHC1P29353 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 RNA5SP485-201ENST00000365053 119 ntBASIC5.77□□□□□ -1.49
SHC1P29353 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHC1P29353 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHC1P29353 DHFRP2-201ENST00000414224 547 ntBASIC5.77□□□□□ -1.49
SHC1P29353 AL157884.1-201ENST00000424561 454 ntBASIC5.77□□□□□ -1.49
SHC1P29353 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.77□□□□□ -1.49
SHC1P29353 MARK2P8-201ENST00000476069 952 ntBASIC5.77□□□□□ -1.49
SHC1P29353 AC098818.1-201ENST00000478593 252 ntBASIC5.77□□□□□ -1.49
SHC1P29353 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 AC106822.1-201ENST00000502647 526 ntBASIC5.77□□□□□ -1.49
SHC1P29353 AC091965.3-201ENST00000506236 208 ntBASIC5.77□□□□□ -1.49
SHC1P29353 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 AC093816.1-201ENST00000515076 913 ntBASIC5.77□□□□□ -1.49
SHC1P29353 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.77□□□□□ -1.49
SHC1P29353 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.77□□□□□ -1.49
SHC1P29353 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.77□□□□□ -1.49
SHC1P29353 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.77□□□□□ -1.49
SHC1P29353 AC011891.2-201ENST00000604949 397 ntBASIC5.77□□□□□ -1.49
SHC1P29353 MIR6889-201ENST00000613185 59 ntBASIC5.77□□□□□ -1.49
SHC1P29353 AC012676.3-201ENST00000614983 479 ntBASIC5.77□□□□□ -1.49
SHC1P29353 AC244100.4-201ENST00000617747 388 ntBASIC5.77□□□□□ -1.49
SHC1P29353 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 AL122023.1-201ENST00000622847 530 ntBASIC5.77□□□□□ -1.49
SHC1P29353 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.77□□□□□ -1.49
SHC1P29353 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SHC1P29353 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.77□□□□□ -1.49
SHC1P29353 AL353763.1-201ENST00000624467 1628 ntBASIC5.77□□□□□ -1.49
SHC1P29353 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.77□□□□□ -1.49
SHC1P29353 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHC1P29353 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHC1P29353 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHC1P29353 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.76□□□□□ -1.49
SHC1P29353 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms