Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SNORA30B-201ENST00000365319 129 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 UBBP1-201ENST00000392399 473 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 AL035467.1-201ENST00000403583 686 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AL359092.1-201ENST00000417156 265 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 AL929472.1-201ENST00000417484 429 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC138761.5-201ENST00000433967 325 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AL390198.2-201ENST00000510553 222 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 RNU6-1334P-201ENST00000516032 105 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 IGKV2D-38-201ENST00000518423 240 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 CIPC-206ENST00000555611 599 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 NDUFA3P1-201ENST00000588007 252 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 AL161931.1-201ENST00000612768 246 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC138965.3-201ENST00000623875 498 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC073488.9-201ENST00000631601 754 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DMAP28067 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DMAP28067 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.4□□□□□ -1.55
HLA-DMAP28067 AC002525.1-201ENST00000624392 1622 ntBASIC5.4□□□□□ -1.55
HLA-DMAP28067 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DMAP28067 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.4□□□□□ -1.55
HLA-DMAP28067 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DMAP28067 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DMAP28067 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.4□□□□□ -1.55
HLA-DMAP28067 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DMAP28067 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DMAP28067 LINC02019-201ENST00000608605 2060 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC020633.1-201ENST00000468439 2247 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 SAGE3P-201ENST00000619800 1635 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 PDCL3P5-201ENST00000398028 722 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AL136100.1-201ENST00000407696 330 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC109638.1-201ENST00000417406 326 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 RPL23AP85-201ENST00000421838 433 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 AL354707.3-201ENST00000427308 331 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 AL136231.1-201ENST00000429407 730 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AL731534.1-201ENST00000434711 269 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DMAP28067 RPL7AP71-201ENST00000451120 739 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 SRP68P2-201ENST00000456184 254 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC099340.1-201ENST00000475247 599 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 TRBV5-2-201ENST00000489095 273 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AP004609.2-201ENST00000532177 190 ntBASIC5.39□□□□□ -1.55
HLA-DMAP28067 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DMAP28067 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms