Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 RPSAP62-201ENST00000432596 833 ntBASIC8.33□□□□□ -1.08
RFX1P22670 DEFA9P-201ENST00000433042 285 ntBASIC8.33□□□□□ -1.08
RFX1P22670 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.33□□□□□ -1.08
RFX1P22670 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.33□□□□□ -1.08
RFX1P22670 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.33□□□□□ -1.08
RFX1P22670 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.33□□□□□ -1.08
RFX1P22670 MTND6P5-201ENST00000448266 512 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AC093166.3-201ENST00000448785 303 ntBASIC8.33□□□□□ -1.08
RFX1P22670 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 AL590326.1-201ENST00000460857 334 ntBASIC8.33□□□□□ -1.08
RFX1P22670 RPL34P22-201ENST00000468193 318 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AC104689.1-201ENST00000473356 768 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AC131233.1-201ENST00000479200 955 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AC079080.1-201ENST00000479841 822 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC8.33□□□□□ -1.08
RFX1P22670 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.33□□□□□ -1.08
RFX1P22670 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 AP003385.2-201ENST00000524910 973 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC8.33□□□□□ -1.08
RFX1P22670 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC8.33□□□□□ -1.08
RFX1P22670 AP001646.2-201ENST00000528645 1156 ntBASIC8.33□□□□□ -1.08
RFX1P22670 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
RFX1P22670 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC8.33□□□□□ -1.08
RFX1P22670 AC023080.1-201ENST00000551663 931 ntBASIC8.33□□□□□ -1.08
RFX1P22670 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC8.33□□□□□ -1.08
RFX1P22670 AL390195.2-201ENST00000564771 2023 ntBASIC8.33□□□□□ -1.08
RFX1P22670 MIR3912-201ENST00000577566 105 ntBASIC8.33□□□□□ -1.08
RFX1P22670 MIR3915-201ENST00000578518 97 ntBASIC8.33□□□□□ -1.08
RFX1P22670 MIR5708-201ENST00000579723 85 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.33□□□□□ -1.08
RFX1P22670 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.33□□□□□ -1.08
RFX1P22670 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.33□□□□□ -1.08
RFX1P22670 AP001542.2-201ENST00000593141 364 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AC004890.3-201ENST00000605566 1095 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC8.33□□□□□ -1.08
RFX1P22670 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC8.33□□□□□ -1.08
RFX1P22670 AC099676.1-201ENST00000608886 657 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AC004223.4-201ENST00000612426 332 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC8.33□□□□□ -1.08
RFX1P22670 AC239600.2-201ENST00000619615 1165 ntBASIC8.33□□□□□ -1.08
RFX1P22670 AL359757.1-201ENST00000623176 255 ntBASIC8.33□□□□□ -1.08
RFX1P22670 MIR4278-201ENST00000636094 69 ntBASIC8.33□□□□□ -1.08
RFX1P22670 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RFX1P22670 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
RFX1P22670 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC8.33□□□□□ -1.08
RFX1P22670 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RFX1P22670 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
RFX1P22670 MAPK10-281ENST00000641170 3070 ntBASIC8.33□□□□□ -1.08
RFX1P22670 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RFX1P22670 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.33□□□□□ -1.08
RFX1P22670 CDYLP1-201ENST00000419017 1458 ntBASIC8.32□□□□□ -1.08
RFX1P22670 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.32□□□□□ -1.08
RFX1P22670 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 ANKRD20A17P-201ENST00000511745 1330 ntBASIC8.32□□□□□ -1.08
RFX1P22670 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 MAPK10-290ENST00000641237 2826 ntBASIC8.32□□□□□ -1.08
RFX1P22670 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.32□□□□□ -1.08
RFX1P22670 MARK2P10-201ENST00000454959 1437 ntBASIC8.32□□□□□ -1.08
RFX1P22670 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
RFX1P22670 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 AC022028.1-201ENST00000412054 408 ntBASIC8.32□□□□□ -1.08
RFX1P22670 AF274854.1-201ENST00000413236 615 ntBASIC8.32□□□□□ -1.08
RFX1P22670 CLIC4P3-201ENST00000422221 752 ntBASIC8.32□□□□□ -1.08
RFX1P22670 RPS7P12-201ENST00000422385 582 ntBASIC8.32□□□□□ -1.08
RFX1P22670 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.32□□□□□ -1.08
RFX1P22670 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RFX1P22670 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.32□□□□□ -1.08
RFX1P22670 AL354872.1-201ENST00000456361 967 ntBASIC8.32□□□□□ -1.08
RFX1P22670 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC8.32□□□□□ -1.08
RFX1P22670 RPL5P15-201ENST00000475870 897 ntBASIC8.32□□□□□ -1.08
RFX1P22670 AC117394.1-201ENST00000477323 567 ntBASIC8.32□□□□□ -1.08
RFX1P22670 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.32□□□□□ -1.08
RFX1P22670 AC010409.2-201ENST00000505780 478 ntBASIC8.32□□□□□ -1.08
RFX1P22670 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.32□□□□□ -1.08
RFX1P22670 OR7E83P-201ENST00000511021 970 ntBASIC8.32□□□□□ -1.08
RFX1P22670 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC8.32□□□□□ -1.08
RFX1P22670 AC026700.1-201ENST00000512074 544 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms