Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 FAM72A-208ENST00000607379 1139 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 MIR6849-201ENST00000618543 69 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AC130456.6-201ENST00000623745 765 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
ERCC3P19447 AC112255.1-201ENST00000624070 2493 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.24□□□□□ -1.09
ERCC3P19447 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
ERCC3P19447 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
ERCC3P19447 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.24□□□□□ -1.09
ERCC3P19447 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.24□□□□□ -1.09
ERCC3P19447 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.24□□□□□ -1.09
ERCC3P19447 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
ERCC3P19447 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.24□□□□□ -1.09
ERCC3P19447 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.24□□□□□ -1.09
ERCC3P19447 AL034379.1-201ENST00000423216 253 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 AC083855.1-201ENST00000440041 258 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC8.24□□□□□ -1.09
ERCC3P19447 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC8.24□□□□□ -1.09
ERCC3P19447 AC023512.1-201ENST00000444513 499 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 AC107398.1-201ENST00000486904 505 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 RPS26P24-201ENST00000497656 331 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.24□□□□□ -1.09
ERCC3P19447 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC8.24□□□□□ -1.09
ERCC3P19447 GOLGA5P1-201ENST00000507317 980 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 HPRT1P1-201ENST00000509498 657 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC8.24□□□□□ -1.09
ERCC3P19447 MAL2-205ENST00000521048 575 ntTSL 4 BASIC8.24□□□□□ -1.09
ERCC3P19447 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.24□□□□□ -1.09
ERCC3P19447 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 AL049830.4-201ENST00000555149 351 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC8.24□□□□□ -1.09
ERCC3P19447 MIR4312-201ENST00000579909 76 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 VN1R87P-201ENST00000596706 487 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 GAS5-AS1-201ENST00000602767 694 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 AL159169.2-201ENST00000610061 1269 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC8.24□□□□□ -1.09
ERCC3P19447 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.24□□□□□ -1.09
ERCC3P19447 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC8.24□□□□□ -1.09
ERCC3P19447 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.24□□□□□ -1.09
ERCC3P19447 AC119674.1-201ENST00000641611 1210 ntBASIC8.24□□□□□ -1.09
ERCC3P19447 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.24□□□□□ -1.09
ERCC3P19447 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.24□□□□□ -1.09
ERCC3P19447 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.24□□□□□ -1.09
ERCC3P19447 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.24□□□□□ -1.09
ERCC3P19447 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ERCC3P19447 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
ERCC3P19447 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.23□□□□□ -1.09
ERCC3P19447 NEPNP-201ENST00000404786 1371 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.23□□□□□ -1.09
ERCC3P19447 AC138915.4-201ENST00000565549 4147 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.23□□□□□ -1.09
ERCC3P19447 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
ERCC3P19447 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.23□□□□□ -1.09
ERCC3P19447 AC123769.2-201ENST00000624332 5984 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.23□□□□□ -1.09
ERCC3P19447 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
ERCC3P19447 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 PPIAP22-201ENST00000358455 498 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 HNRNPH1P2-201ENST00000396845 1210 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 RPL5P19-201ENST00000404228 893 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 RN7SKP221-201ENST00000410420 301 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 RNU2-18P-201ENST00000411224 162 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AC017078.1-201ENST00000416146 368 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC8.23□□□□□ -1.09
ERCC3P19447 AC006509.1-201ENST00000420788 634 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.23□□□□□ -1.09
ERCC3P19447 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC8.23□□□□□ -1.09
ERCC3P19447 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC8.23□□□□□ -1.09
ERCC3P19447 AC093752.1-206ENST00000511823 336 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 MTCYBP19-201ENST00000517463 1124 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC8.23□□□□□ -1.09
ERCC3P19447 IGLVI-42-201ENST00000522485 381 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.23□□□□□ -1.09
ERCC3P19447 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 AC011611.5-201ENST00000552477 578 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms