Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CFTRP13569 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC10.36□□□□□ -0.75
CFTRP13569 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CFTRP13569 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 AL022331.1-201ENST00000429025 477 ntBASIC10.36□□□□□ -0.75
CFTRP13569 RN7SL547P-201ENST00000490793 290 ntBASIC10.36□□□□□ -0.75
CFTRP13569 OR7E157P-201ENST00000494376 911 ntBASIC10.36□□□□□ -0.75
CFTRP13569 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC10.36□□□□□ -0.75
CFTRP13569 NRBF2P4-201ENST00000520874 850 ntBASIC10.36□□□□□ -0.75
CFTRP13569 IGBP1P1-201ENST00000554337 1009 ntBASIC10.36□□□□□ -0.75
CFTRP13569 SETP3-201ENST00000581726 813 ntBASIC10.36□□□□□ -0.75
CFTRP13569 FKBP1AP1-201ENST00000594588 318 ntBASIC10.36□□□□□ -0.75
CFTRP13569 AL359513.1-201ENST00000614364 557 ntBASIC10.36□□□□□ -0.75
CFTRP13569 AC007683.2-201ENST00000624681 714 ntBASIC10.36□□□□□ -0.75
CFTRP13569 CASC19-264ENST00000641912 1184 ntBASIC10.36□□□□□ -0.75
CFTRP13569 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CFTRP13569 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC10.35□□□□□ -0.75
CFTRP13569 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CFTRP13569 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CFTRP13569 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC10.35□□□□□ -0.75
CFTRP13569 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CFTRP13569 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CFTRP13569 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CFTRP13569 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC10.35□□□□□ -0.75
CFTRP13569 EEF1A1P24-201ENST00000451469 1378 ntBASIC10.35□□□□□ -0.75
CFTRP13569 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC10.35□□□□□ -0.75
CFTRP13569 MIR433-201ENST00000384837 93 ntBASIC10.35□□□□□ -0.75
CFTRP13569 TNPO1P1-201ENST00000423641 1138 ntBASIC10.35□□□□□ -0.75
CFTRP13569 EEF1B2P5-201ENST00000444820 548 ntBASIC10.35□□□□□ -0.75
CFTRP13569 AC115223.1-201ENST00000466377 870 ntBASIC10.35□□□□□ -0.75
CFTRP13569 AC022215.1-201ENST00000481770 362 ntBASIC10.35□□□□□ -0.75
CFTRP13569 AC008629.2-201ENST00000503783 483 ntBASIC10.35□□□□□ -0.75
CFTRP13569 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC10.35□□□□□ -0.75
CFTRP13569 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC10.35□□□□□ -0.75
CFTRP13569 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC10.35□□□□□ -0.75
CFTRP13569 CCL14-204ENST00000622526 472 ntTSL 3 BASIC10.35□□□□□ -0.75
CFTRP13569 AC087269.2-201ENST00000641764 975 ntBASIC10.35□□□□□ -0.75
CFTRP13569 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CFTRP13569 XIST-206ENST00000434839 2865 ntTSL 5 BASIC10.35□□□□□ -0.75
CFTRP13569 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC10.34□□□□□ -0.75
CFTRP13569 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CFTRP13569 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
CFTRP13569 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CFTRP13569 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
CFTRP13569 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CFTRP13569 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC10.34□□□□□ -0.75
CFTRP13569 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CFTRP13569 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CFTRP13569 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC10.34□□□□□ -0.75
CFTRP13569 IGKV1OR10-1-201ENST00000442306 329 ntBASIC10.34□□□□□ -0.75
CFTRP13569 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC10.34□□□□□ -0.75
CFTRP13569 RPS27AP3-201ENST00000453803 454 ntBASIC10.34□□□□□ -0.75
CFTRP13569 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CFTRP13569 AC104164.1-201ENST00000460282 590 ntBASIC10.34□□□□□ -0.75
CFTRP13569 RN7SL222P-201ENST00000476452 299 ntBASIC10.34□□□□□ -0.75
CFTRP13569 AC253576.1-201ENST00000511645 1156 ntBASIC10.34□□□□□ -0.75
CFTRP13569 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC10.34□□□□□ -0.75
CFTRP13569 MRPS16P1-201ENST00000523462 412 ntBASIC10.34□□□□□ -0.75
CFTRP13569 AC073916.1-201ENST00000545095 130 ntBASIC10.34□□□□□ -0.75
CFTRP13569 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CFTRP13569 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC10.34□□□□□ -0.75
CFTRP13569 HCG18-243ENST00000602498 327 ntTSL 3 BASIC10.34□□□□□ -0.75
CFTRP13569 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC10.34□□□□□ -0.75
CFTRP13569 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC10.34□□□□□ -0.75
CFTRP13569 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC10.34□□□□□ -0.75
CFTRP13569 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CFTRP13569 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
CFTRP13569 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CFTRP13569 AL592429.1-201ENST00000403909 1473 ntBASIC10.33□□□□□ -0.76
CFTRP13569 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
CFTRP13569 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
CFTRP13569 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC10.33□□□□□ -0.76
CFTRP13569 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC10.33□□□□□ -0.76
CFTRP13569 AL133270.1-201ENST00000402635 279 ntBASIC10.33□□□□□ -0.76
CFTRP13569 RN7SKP125-201ENST00000410481 302 ntBASIC10.33□□□□□ -0.76
CFTRP13569 EEF1A1P29-201ENST00000416082 1096 ntBASIC10.33□□□□□ -0.76
CFTRP13569 AL139148.1-201ENST00000427122 680 ntBASIC10.33□□□□□ -0.76
CFTRP13569 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC10.33□□□□□ -0.76
CFTRP13569 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC10.33□□□□□ -0.76
CFTRP13569 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC10.33□□□□□ -0.76
CFTRP13569 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC10.33□□□□□ -0.76
CFTRP13569 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC10.33□□□□□ -0.76
CFTRP13569 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CFTRP13569 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC10.32□□□□□ -0.76
CFTRP13569 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms