Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TOP2AP11388 AC109780.1-201ENST00000451768 1344 ntBASIC10.6□□□□□ -0.71
TOP2AP11388 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
TOP2AP11388 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
TOP2AP11388 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TOP2AP11388 RNA5SP211-201ENST00000365516 117 ntBASIC10.59□□□□□ -0.71
TOP2AP11388 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC10.59□□□□□ -0.71
TOP2AP11388 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
TOP2AP11388 RPS3AP15-201ENST00000483874 781 ntBASIC10.59□□□□□ -0.71
TOP2AP11388 IGLV3-30-201ENST00000524362 298 ntBASIC10.59□□□□□ -0.71
TOP2AP11388 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC10.59□□□□□ -0.71
TOP2AP11388 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
TOP2AP11388 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
TOP2AP11388 FO082842.1-201ENST00000423552 1370 ntBASIC10.59□□□□□ -0.71
TOP2AP11388 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
TOP2AP11388 AC104581.5-201ENST00000624171 7141 ntBASIC10.59□□□□□ -0.71
TOP2AP11388 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
TOP2AP11388 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
TOP2AP11388 AP002364.1-201ENST00000623330 3386 ntBASIC10.59□□□□□ -0.71
TOP2AP11388 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
TOP2AP11388 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
TOP2AP11388 OFD1P17-201ENST00000437639 3018 ntBASIC10.59□□□□□ -0.71
TOP2AP11388 AC011369.2-201ENST00000624423 1567 ntBASIC10.59□□□□□ -0.71
TOP2AP11388 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC10.58□□□□□ -0.71
TOP2AP11388 OR10R3P-201ENST00000361688 942 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 RNA5SP350-201ENST00000363298 111 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 MIR105-2-201ENST00000385083 81 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 MIR640-201ENST00000385086 96 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC10.58□□□□□ -0.72
TOP2AP11388 AL627308.1-201ENST00000435693 821 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 FMO7P-201ENST00000436045 768 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 AC073594.1-201ENST00000462065 364 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 OR7E158P-201ENST00000524483 910 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC10.58□□□□□ -0.72
TOP2AP11388 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC10.58□□□□□ -0.72
TOP2AP11388 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
TOP2AP11388 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TOP2AP11388 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC10.58□□□□□ -0.72
TOP2AP11388 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TOP2AP11388 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
TOP2AP11388 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TOP2AP11388 UGT2B27P-201ENST00000505092 1620 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC10.58□□□□□ -0.72
TOP2AP11388 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC10.58□□□□□ -0.72
TOP2AP11388 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TOP2AP11388 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TOP2AP11388 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TOP2AP11388 AL359091.1-201ENST00000449048 1734 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TOP2AP11388 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC10.58□□□□□ -0.72
TOP2AP11388 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
TOP2AP11388 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC10.58□□□□□ -0.72
TOP2AP11388 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TOP2AP11388 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC10.58□□□□□ -0.72
TOP2AP11388 AC126120.1-201ENST00000431082 470 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC10.58□□□□□ -0.72
TOP2AP11388 SBDSP1-204ENST00000453858 737 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 RN7SL57P-201ENST00000493687 290 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 IGHV1-14-201ENST00000523391 241 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC10.58□□□□□ -0.72
TOP2AP11388 AC087269.2-201ENST00000641764 975 ntBASIC10.58□□□□□ -0.72
TOP2AP11388 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
TOP2AP11388 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC10.57□□□□□ -0.72
TOP2AP11388 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
TOP2AP11388 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC10.57□□□□□ -0.72
TOP2AP11388 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC10.57□□□□□ -0.72
TOP2AP11388 AC110597.1-201ENST00000562669 3176 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC10.57□□□□□ -0.72
TOP2AP11388 AC092111.1-201ENST00000618256 3358 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 RN7SKP124-201ENST00000364730 341 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
TOP2AP11388 AL163193.1-201ENST00000444895 788 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC10.57□□□□□ -0.72
TOP2AP11388 RPL23AP60-201ENST00000450011 454 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 DUTP7-201ENST00000507982 486 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC10.57□□□□□ -0.72
TOP2AP11388 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC10.57□□□□□ -0.72
TOP2AP11388 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC10.57□□□□□ -0.72
TOP2AP11388 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC10.57□□□□□ -0.72
TOP2AP11388 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TOP2AP11388 AC013731.1-201ENST00000604340 883 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC10.57□□□□□ -0.72
TOP2AP11388 AC024255.1-201ENST00000614376 102 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 AC004808.2-201ENST00000627965 773 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 AC087565.3-203ENST00000641018 837 ntBASIC10.57□□□□□ -0.72
TOP2AP11388 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC10.57□□□□□ -0.72
TOP2AP11388 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
TOP2AP11388 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TOP2AP11388 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
TOP2AP11388 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC10.56□□□□□ -0.72
TOP2AP11388 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TOP2AP11388 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms