| MT1A | P04731 | AL731544.1-201 | ENST00000436500 | 370 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | MRPS21P3-201 | ENST00000436696 | 262 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | OR3D1P-201 | ENST00000438288 | 955 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | MIR4435-2HG-209 | ENST00000441075 | 704 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL645936.1-201 | ENST00000441979 | 518 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC009237.1-201 | ENST00000442127 | 744 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | OR13K1P-201 | ENST00000444577 | 975 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL358074.1-201 | ENST00000444800 | 509 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC114814.1-201 | ENST00000444926 | 691 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | TIMM8BP2-201 | ENST00000445940 | 251 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC079612.2-201 | ENST00000446029 | 348 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL022237.1-201 | ENST00000446663 | 358 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL355390.2-201 | ENST00000446691 | 880 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AP002856.1-201 | ENST00000447864 | 562 nt | TSL 4 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC092967.1-201 | ENST00000449016 | 481 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL451063.1-201 | ENST00000450164 | 1133 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | HIGD1AP16-201 | ENST00000450986 | 258 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | YRDCP3-201 | ENST00000456507 | 480 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RANP2-201 | ENST00000456833 | 229 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RARRES2P3-201 | ENST00000457739 | 473 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | TNS3-209 | ENST00000458317 | 1156 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RN7SL254P-201 | ENST00000460609 | 284 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RN7SL552P-201 | ENST00000462094 | 276 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC106822.1-201 | ENST00000502647 | 526 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | SNX18P24-201 | ENST00000505249 | 671 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC108866.1-204 | ENST00000508362 | 558 nt | TSL 4 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | MGC32805-204 | ENST00000509993 | 783 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RNA5SP206-201 | ENST00000516703 | 121 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RN7SKP183-201 | ENST00000517169 | 324 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC087360.1-201 | ENST00000518788 | 616 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | H2AFV-208 | ENST00000521529 | 439 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AP003469.1-202 | ENST00000521884 | 478 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC025871.2-201 | ENST00000522589 | 511 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AP001972.1-201 | ENST00000529215 | 506 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RPA2P3-201 | ENST00000533268 | 770 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | TMEM126B-211 | ENST00000534341 | 1273 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AP001858.2-201 | ENST00000536213 | 601 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC069208.1-201 | ENST00000540811 | 676 nt | TSL 4 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | LRTOMT-218 | ENST00000541614 | 726 nt | TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AP000593.3-201 | ENST00000546065 | 578 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC090709.1-201 | ENST00000548384 | 716 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC025031.1-201 | ENST00000552634 | 562 nt | TSL 4 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL157871.6-201 | ENST00000553954 | 206 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RGS6-215 | ENST00000554782 | 1110 nt | TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC127522.1-201 | ENST00000560531 | 751 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC022872.1-201 | ENST00000568391 | 781 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC138907.7-201 | ENST00000568972 | 358 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | MIR3189-201 | ENST00000578735 | 73 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | SEPT4-AS1-202 | ENST00000580589 | 653 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | ODF4-202 | ENST00000584943 | 804 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC011462.3-201 | ENST00000598988 | 540 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | SMIM12P1-201 | ENST00000603004 | 274 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL591167.1-201 | ENST00000607321 | 456 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL161457.2-204 | ENST00000609241 | 869 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL445465.1-206 | ENST00000609544 | 528 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL135999.3-201 | ENST00000610501 | 812 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC006924.1-201 | ENST00000610750 | 559 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | Metazoa_SRP.94-201 | ENST00000612609 | 250 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | U1.25-201 | ENST00000614085 | 162 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC024255.1-201 | ENST00000614376 | 102 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | Metazoa_SRP.199-201 | ENST00000615501 | 281 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | uc_338.31-201 | ENST00000615595 | 186 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AL133342.1-201 | ENST00000618168 | 366 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | U1.34-201 | ENST00000618578 | 162 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | U1.31-201 | ENST00000620022 | 160 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC079298.3-201 | ENST00000624941 | 977 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | LINC01435-220 | ENST00000630847 | 714 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | LINC00969-332 | ENST00000630874 | 738 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | COPS7B-225 | ENST00000631349 | 189 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AF067845.4-201 | ENST00000633198 | 480 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | 5S_rRNA.29-201 | ENST00000641250 | 107 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | CACNA1E-210 | ENST00000621791 | 16171 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | KCNQ3-205 | ENST00000621976 | 10659 nt | APPRIS ALT2 TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | PRRC2C-202 | ENST00000367742 | 10366 nt | APPRIS ALT2 TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | UPF2-201 | ENST00000356352 | 5569 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | ZNF112-201 | ENST00000337401 | 3321 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC007557.3-201 | ENST00000418591 | 3135 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | VEPH1-202 | ENST00000392832 | 3044 nt | APPRIS P1 TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | PLD5-203 | ENST00000427495 | 3018 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | MYPN-204 | ENST00000540630 | 5707 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | LARP7-210 | ENST00000509061 | 2332 nt | TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | ST6GALNAC3-201 | ENST00000328299 | 6861 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | KIAA0586-203 | ENST00000423743 | 5339 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | DCTN5-201 | ENST00000300087 | 11011 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | FGFR2-205 | ENST00000357555 | 3690 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | BCORP1-202 | ENST00000441139 | 3461 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | SEC61A2-202 | ENST00000304267 | 2030 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | MECOM-203 | ENST00000460814 | 3374 nt | TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | AC007159.1-201 | ENST00000566529 | 4706 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | MEF2C-249 | ENST00000637481 | 6088 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | OSBPL6-207 | ENST00000409631 | 3273 nt | TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | ZNF490-201 | ENST00000311437 | 4237 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | DZIP3-202 | ENST00000463306 | 4246 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | CXCR2-201 | ENST00000318507 | 2879 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | GTSF1-209 | ENST00000552397 | 1621 nt | APPRIS P1 TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | MRE11-204 | ENST00000407439 | 2684 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | OR51E1-201 | ENST00000396952 | 3612 nt | APPRIS P1 BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | RAD51B-210 | ENST00000487270 | 2596 nt | TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | BIN2P1-201 | ENST00000504996 | 1530 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| MT1A | P04731 | COX7B-203 | ENST00000481445 | 2471 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |