Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.79□□□□□ -1.48
SPTA1P02549 RN7SL382P-201ENST00000482631 282 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 CR383658.1-201ENST00000514609 734 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AC008055.1-201ENST00000547032 609 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.79□□□□□ -1.48
SPTA1P02549 AP001784.1-201ENST00000624107 428 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 AC007993.1-201ENST00000621298 2430 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC5.79□□□□□ -1.48
SPTA1P02549 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.79□□□□□ -1.48
SPTA1P02549 AL359195.2-201ENST00000623657 4412 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 XRCC6P4-201ENST00000518193 2067 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.79□□□□□ -1.48
SPTA1P02549 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC5.79□□□□□ -1.48
SPTA1P02549 AC091153.1-201ENST00000466297 402 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 RPSAP37-201ENST00000470913 821 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AC090142.2-201ENST00000483263 416 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.79□□□□□ -1.48
SPTA1P02549 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 ZNF322P1-201ENST00000568013 1209 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 MIR1269B-201ENST00000580405 75 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 MIR6809-201ENST00000612189 116 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AC026951.2-201ENST00000613847 241 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AC010333.3-201ENST00000615100 402 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AC245014.3-201ENST00000618589 347 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AL136228.1-201ENST00000622221 319 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 TSHZ2-205ENST00000626626 670 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC5.79□□□□□ -1.48
SPTA1P02549 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 AL139384.2-201ENST00000613809 3590 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AC011416.1-201ENST00000514947 1732 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 AC103591.2-201ENST00000265259 766 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 RNA5SP333-201ENST00000363466 118 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 RNA5SP334-201ENST00000364825 118 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 U3.43-201ENST00000410734 213 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 RN7SKP121-201ENST00000410842 305 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 MTND6P1-201ENST00000417434 424 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SPTA1P02549 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SPTA1P02549 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.78□□□□□ -1.48
SPTA1P02549 RPSAP50-201ENST00000481955 852 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 RPL34P33-201ENST00000486062 334 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 AC093267.1-201ENST00000489176 961 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 RPA2P1-201ENST00000556557 721 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 MRPS5P4-201ENST00000592830 325 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 AC111186.1-201ENST00000604684 130 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 AC245389.2-201ENST00000616023 576 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 AC242843.1-201ENST00000618702 573 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 AC015689.2-201ENST00000528172 1738 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC5.78□□□□□ -1.48
SPTA1P02549 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPTA1P02549 AP006222.1-205ENST00000450734 457 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 HIGD1AP16-201ENST00000450986 258 ntBASIC5.78□□□□□ -1.48
SPTA1P02549 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.78□□□□□ -1.48
SPTA1P02549 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.78□□□□□ -1.48
SPTA1P02549 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms