Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC112243.1-201ENST00000623949 3851 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
COL1A1P02452 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.47□□□□□ -1.21
COL1A1P02452 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
COL1A1P02452 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 HDAC1P2-201ENST00000453661 1398 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.47□□□□□ -1.21
COL1A1P02452 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.47□□□□□ -1.21
COL1A1P02452 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 RNA5SP500-201ENST00000364486 119 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 RNU11-6P-201ENST00000391127 133 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 RPS7P8-201ENST00000418311 581 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.47□□□□□ -1.21
COL1A1P02452 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.47□□□□□ -1.21
COL1A1P02452 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.47□□□□□ -1.21
COL1A1P02452 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.47□□□□□ -1.21
COL1A1P02452 CLUHP1-201ENST00000435012 1190 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 GAPDHP48-201ENST00000436626 961 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 PCBP2P1-201ENST00000437262 977 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 HMGN1P36-201ENST00000446623 298 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.47□□□□□ -1.21
COL1A1P02452 BZW1P1-201ENST00000454901 1240 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.47□□□□□ -1.21
COL1A1P02452 AC074386.1-201ENST00000476560 767 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.47□□□□□ -1.21
COL1A1P02452 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.47□□□□□ -1.21
COL1A1P02452 AC079600.1-201ENST00000550326 297 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.47□□□□□ -1.21
COL1A1P02452 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
COL1A1P02452 AC005229.3-201ENST00000603438 323 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 RNA5SP440-201ENST00000612665 119 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 AL512624.1-201ENST00000613638 469 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 AC127024.8-201ENST00000623719 2094 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 CDY5P-201ENST00000411487 1580 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 CDY9P-201ENST00000451397 1580 ntBASIC7.47□□□□□ -1.21
COL1A1P02452 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
COL1A1P02452 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
COL1A1P02452 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
COL1A1P02452 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL1A1P02452 AC024587.1-201ENST00000505925 2157 ntBASIC7.46□□□□□ -1.21
COL1A1P02452 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.21
COL1A1P02452 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.46□□□□□ -1.21
COL1A1P02452 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL1A1P02452 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL1A1P02452 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL1A1P02452 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL1A1P02452 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL1A1P02452 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL1A1P02452 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL1A1P02452 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL1A1P02452 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.46□□□□□ -1.22
COL1A1P02452 AP001541.1-201ENST00000623322 1904 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
COL1A1P02452 RNA5SP242-201ENST00000364171 118 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL1A1P02452 BMS1P13-201ENST00000417301 885 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 BX510359.3-201ENST00000422168 306 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.46□□□□□ -1.22
COL1A1P02452 NDUFS5P5-201ENST00000437256 321 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 AL355355.1-201ENST00000442900 793 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 BMS1P10-201ENST00000443754 1120 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.46□□□□□ -1.22
COL1A1P02452 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.46□□□□□ -1.22
COL1A1P02452 AC023141.9-201ENST00000458734 412 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.46□□□□□ -1.22
COL1A1P02452 RN7SL717P-201ENST00000478343 297 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.46□□□□□ -1.22
COL1A1P02452 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.46□□□□□ -1.22
COL1A1P02452 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.46□□□□□ -1.22
COL1A1P02452 AC009237.12-201ENST00000604755 742 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL1A1P02452 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
COL1A1P02452 AC015689.2-201ENST00000528172 1738 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 AC005618.1-201ENST00000606901 3148 ntBASIC7.46□□□□□ -1.22
COL1A1P02452 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL1A1P02452 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL1A1P02452 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
COL1A1P02452 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.45□□□□□ -1.22
COL1A1P02452 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.45□□□□□ -1.22
COL1A1P02452 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
COL1A1P02452 RNA5SP156-201ENST00000410250 110 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 EEF1B2P8-201ENST00000414101 671 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 RPS14P4-201ENST00000415880 418 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.45□□□□□ -1.22
COL1A1P02452 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.45□□□□□ -1.22
COL1A1P02452 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.45□□□□□ -1.22
COL1A1P02452 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.45□□□□□ -1.22
COL1A1P02452 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL1A1P02452 AC073581.1-201ENST00000519036 575 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 AC027544.3-201ENST00000535082 757 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.45□□□□□ -1.22
COL1A1P02452 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms