Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.24□□□□□ -1.41
SHOX2O60902 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.24□□□□□ -1.41
SHOX2O60902 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 RPS26P6-201ENST00000475156 348 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.24□□□□□ -1.41
SHOX2O60902 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SHOX2O60902 AC111000.6-201ENST00000514471 709 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.24□□□□□ -1.41
SHOX2O60902 PPIAP6-201ENST00000557078 499 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 MIR1273F-201ENST00000580581 99 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.24□□□□□ -1.41
SHOX2O60902 MIR4660-201ENST00000583549 74 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.24□□□□□ -1.41
SHOX2O60902 AC012640.3-201ENST00000607847 430 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 AC073857.1-201ENST00000625082 1054 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 AC002525.1-201ENST00000624392 1622 ntBASIC6.24□□□□□ -1.41
SHOX2O60902 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHOX2O60902 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.24□□□□□ -1.41
SHOX2O60902 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.24□□□□□ -1.41
SHOX2O60902 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHOX2O60902 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.24□□□□□ -1.41
SHOX2O60902 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.24□□□□□ -1.41
SHOX2O60902 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHOX2O60902 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SHOX2O60902 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.23□□□□□ -1.41
SHOX2O60902 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SHOX2O60902 RN7SKP185-201ENST00000362813 326 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC079809.1-201ENST00000415468 276 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.23□□□□□ -1.41
SHOX2O60902 AL929472.1-201ENST00000417484 429 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.23□□□□□ -1.41
SHOX2O60902 ANXA2P2-201ENST00000435128 1020 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.23□□□□□ -1.41
SHOX2O60902 RPS10P18-201ENST00000442662 495 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.23□□□□□ -1.41
SHOX2O60902 VPS25P1-201ENST00000455691 508 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC073594.1-201ENST00000462065 364 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 RPSAP48-201ENST00000466509 889 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 RN7SL145P-201ENST00000469955 296 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.23□□□□□ -1.41
SHOX2O60902 AC131392.1-201ENST00000506490 633 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.23□□□□□ -1.41
SHOX2O60902 SCARNA18.2-201ENST00000516882 84 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.23□□□□□ -1.41
SHOX2O60902 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.23□□□□□ -1.41
SHOX2O60902 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.23□□□□□ -1.41
SHOX2O60902 MIR4685-201ENST00000578185 69 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC011193.2-201ENST00000582638 367 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.23□□□□□ -1.41
SHOX2O60902 AC006924.1-201ENST00000610750 559 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AL161931.1-201ENST00000612768 246 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.23□□□□□ -1.41
SHOX2O60902 AC006328.2-201ENST00000623198 397 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC012005.2-201ENST00000624333 397 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 AC008626.2-201ENST00000624425 248 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.23□□□□□ -1.41
SHOX2O60902 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
SHOX2O60902 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHOX2O60902 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.23□□□□□ -1.41
SHOX2O60902 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SHOX2O60902 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.23□□□□□ -1.41
SHOX2O60902 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SHOX2O60902 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.23□□□□□ -1.41
SHOX2O60902 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHOX2O60902 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
SHOX2O60902 AC092376.2-201ENST00000622621 4116 ntBASIC6.23□□□□□ -1.41
SHOX2O60902 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHOX2O60902 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 TCP11X1-202ENST00000622971 1372 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 RN7SKP145-201ENST00000363291 303 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.22□□□□□ -1.41
SHOX2O60902 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.22□□□□□ -1.41
SHOX2O60902 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 522.5 ms