Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 CYCSP25-201ENST00000525280 316 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC023968.1-201ENST00000560719 475 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 MIR4502-201ENST00000580432 81 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC134669.1-201ENST00000581275 672 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC139493.1-201ENST00000604368 397 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AP002345.2-201ENST00000609961 904 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 MIR6085-201ENST00000618314 110 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AL109924.4-201ENST00000623089 670 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC018692.2-201ENST00000624130 348 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AL162377.2-201ENST00000624532 337 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AP002370.1-201ENST00000528055 1602 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 DNM1P47-203ENST00000571780 12667 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC009779.8-201ENST00000641684 4384 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 TMCC1P1-201ENST00000518897 1980 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 YWHAZP6-201ENST00000399764 738 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 RPL5P20-201ENST00000403848 896 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 RANP7-201ENST00000418085 644 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AC099782.1-201ENST00000425889 474 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AC108479.1-201ENST00000431142 427 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 FABP5P2-201ENST00000439042 408 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AC090589.1-201ENST00000473109 362 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 RPL23AP68-201ENST00000480924 445 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 RPL5P14-201ENST00000494197 878 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 PFN1P8-201ENST00000497012 543 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 H3F3AP3-201ENST00000497682 407 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 RNA5SP418-201ENST00000515951 117 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 SCARNA5-201ENST00000516201 276 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 NPIPB14P-203ENST00000532298 987 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 TOMM20P1-201ENST00000534518 427 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AL845552.1-201ENST00000556820 323 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AC090286.3-201ENST00000573133 187 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AL135999.3-201ENST00000610501 812 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 AL596275.2-208ENST00000641192 594 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 CYP2G2P-201ENST00000594920 1485 ntBASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA3F8WFD2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 AL359976.1-201ENST00000418655 3528 ntBASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA3F8WFD2 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms