Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 EIF1P4-201ENST00000572664 335 ntBASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 MIR4312-201ENST00000579909 76 ntBASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 AL158151.4-201ENST00000600965 507 ntBASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 AC073137.1-201ENST00000605636 634 ntBASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 MIR6849-201ENST00000618543 69 ntBASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 AC078909.2-201ENST00000620584 398 ntBASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 MIR6823-201ENST00000622118 61 ntBASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 uc_338.21-201ENST00000622458 147 ntBASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC9.05□□□□□ -0.96
ZC3H4Q9UPT8 ZNF90P1-201ENST00000480493 1951 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL590004.4-201ENST00000566733 7060 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL133268.1-201ENST00000405676 1401 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 FGG-205ENST00000407946 1636 ntTSL 5 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 RNA5SP122-201ENST00000384457 108 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 RNA5SP53-201ENST00000391299 120 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC019178.1-201ENST00000392337 440 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 MCTS2P-201ENST00000394552 546 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL590084.2-201ENST00000401481 382 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 RN7SKP261-201ENST00000410948 278 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL590004.3-202ENST00000445883 451 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AURKAPS1-201ENST00000451805 1212 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 RPL29P23-201ENST00000486188 442 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 RN7SKP5-201ENST00000517045 272 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 MIR548S-201ENST00000581352 82 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC012417.1-201ENST00000582307 1039 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC007448.1-201ENST00000582714 234 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 PRELID3BP3-201ENST00000584963 545 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 EIF4A2P1-201ENST00000587313 1063 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC022146.1-201ENST00000595307 847 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 VN1R82P-201ENST00000601481 356 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL356055.1-201ENST00000602528 446 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL136363.2-201ENST00000604173 851 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC138749.5-201ENST00000611461 208 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AC008083.4-201ENST00000615076 444 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 HOTTIP_2.1-201ENST00000616633 376 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL356596.1-201ENST00000624230 379 ntBASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC9.04□□□□□ -0.96
ZC3H4Q9UPT8 PHF2P2-202ENST00000444553 2865 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 MTND4P29-201ENST00000503122 1372 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AP000641.1-201ENST00000531988 1639 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC124045.1-201ENST00000606008 1953 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 Y_RNA.560-201ENST00000384689 102 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC005522.1-201ENST00000395416 346 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 COX6A1P3-201ENST00000404167 293 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 RNU2-16P-201ENST00000410712 136 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 RN7SKP91-201ENST00000410852 288 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 AC092638.1-201ENST00000411966 1275 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 USP9YP33-201ENST00000412220 421 ntBASIC9.03□□□□□ -0.96
ZC3H4Q9UPT8 ZBTB8OSP2-201ENST00000423890 504 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms