Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC106785.4-201ENST00000569492 412 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC004232.1-201ENST00000571388 208 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 MIR3157-201ENST00000578688 85 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 WBP1LP11-201ENST00000586141 328 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 RPL29P33-201ENST00000587474 316 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC074141.1-201ENST00000588129 2995 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC090330.1-201ENST00000588646 764 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC012175.1-201ENST00000603755 531 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 WBP1LP8-201ENST00000617401 327 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 MIR6503-201ENST00000622884 86 ntBASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
DKK3Q9UBP4 AC010329.1-201ENST00000593903 8328 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC093278.2-201ENST00000564956 2485 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC245036.1-201ENST00000391727 309 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AL359694.1-201ENST00000403247 604 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AL033519.1-201ENST00000407266 307 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 RN7SKP296-201ENST00000411185 341 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 RPS7P12-201ENST00000422385 582 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC245452.2-201ENST00000435222 392 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AL031681.1-201ENST00000443304 400 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 RN7SL834P-201ENST00000461450 286 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 RPL5P11-201ENST00000498068 893 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 DNAJC19P3-201ENST00000594491 331 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC022387.2-201ENST00000604050 448 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 BNIP3P41-202ENST00000616656 861 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AP000577.1-201ENST00000624366 878 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 PSMC1P6-201ENST00000477233 1319 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 AC119674.1-204ENST00000641348 1343 ntBASIC6.74□□□□□ -1.33
DKK3Q9UBP4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.74□□□□□ -1.33
DKK3Q9UBP4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DKK3Q9UBP4 AL596244.1-201ENST00000567068 3779 ntBASIC6.73□□□□□ -1.33
DKK3Q9UBP4 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DKK3Q9UBP4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
DKK3Q9UBP4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms