Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC027279.4-201ENST00000624371 2072 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
USP35Q9P2H5 CNOT6LP1-201ENST00000559681 1462 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 RPL11P4-201ENST00000332269 436 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 SNORA51.1-201ENST00000363243 140 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 RNA5SP172-201ENST00000365061 118 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 RNA5SP474-201ENST00000391234 90 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC017078.1-201ENST00000416146 368 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 CR848007.2-201ENST00000424918 787 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC017019.1-201ENST00000426129 261 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 AL391987.1-201ENST00000441025 200 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 MEF2AP1-201ENST00000454867 863 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 RPL7P51-201ENST00000490532 749 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 FTH1P8-201ENST00000498161 514 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC091849.1-201ENST00000509920 121 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC106800.2-201ENST00000514009 1103 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 COX6B1P4-201ENST00000519826 484 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC012414.2-201ENST00000559474 187 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC114477.1-201ENST00000605097 605 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AL683813.2-201ENST00000605245 502 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AC004908.1-201ENST00000606572 541 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AL023583.1-201ENST00000607518 1143 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 Six3os1_1.1-201ENST00000620900 87 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 AL035425.4-201ENST00000624509 1063 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 AL596275.2-203ENST00000641951 371 ntBASIC9.05□□□□□ -0.96
USP35Q9P2H5 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
USP35Q9P2H5 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 MR1-209ENST00000617803 7584 ntTSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
USP35Q9P2H5 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
USP35Q9P2H5 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
USP35Q9P2H5 IARS-213ENST00000627121 4587 ntTSL 5 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC007993.1-201ENST00000621298 2430 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
USP35Q9P2H5 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
USP35Q9P2H5 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 PPIAP26-201ENST00000377951 522 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC003045.1-201ENST00000398779 713 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 AL359694.1-201ENST00000403247 604 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 RAB9AP4-201ENST00000415230 609 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC114755.4-201ENST00000439114 443 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 HMGN1P17-201ENST00000513734 295 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 SETP21-201ENST00000514799 892 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC023968.1-201ENST00000560719 475 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC007255.2-201ENST00000604053 631 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 WBP1LP8-201ENST00000617401 327 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 AC063952.1-203ENST00000634410 658 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 MED6-212ENST00000615788 1700 ntTSL 5 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
USP35Q9P2H5 MAPK10-357ENST00000641831 2858 ntBASIC9.04□□□□□ -0.96
USP35Q9P2H5 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
USP35Q9P2H5 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
USP35Q9P2H5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
USP35Q9P2H5 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC9.04□□□□□ -0.96
USP35Q9P2H5 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 AC104966.1-201ENST00000467010 1464 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 SSX3-202ENST00000376893 800 ntTSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 MIR199B-201ENST00000384849 110 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 USP9YP19-201ENST00000412165 485 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms