Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AC026310.1-201ENST00000396004 378 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 OR2W4P-201ENST00000406496 926 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 RN7SKP221-201ENST00000410420 301 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 CLCN3P1-201ENST00000423965 1017 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 MORF4-201ENST00000447135 971 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 MRPL57P6-201ENST00000506570 309 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AP002004.1-206ENST00000532441 876 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 RPL3P13-201ENST00000550415 216 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 FXYD6P1-201ENST00000604857 285 ntBASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AL096800.1-201ENST00000405326 893 ntBASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AL139100.1-201ENST00000408001 498 ntBASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 GTF2IP14-201ENST00000441415 586 ntBASIC5.88□□□□□ -1.47
VAPAQ9P0L0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 IGHV4-55-201ENST00000520889 368 ntBASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 SYPL1P2-201ENST00000582878 727 ntBASIC5.88□□□□□ -1.47
VAPAQ9P0L0 MIR8082-201ENST00000612488 81 ntBASIC5.88□□□□□ -1.47
VAPAQ9P0L0 OR7A1P-202ENST00000641542 1158 ntBASIC5.88□□□□□ -1.47
VAPAQ9P0L0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.88□□□□□ -1.47
VAPAQ9P0L0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AP001157.1-201ENST00000550837 2339 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AC010894.1-201ENST00000313760 361 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 SNORA43.1-201ENST00000364863 140 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 HSPE1P27-201ENST00000430808 296 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AL365220.1-201ENST00000432923 399 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms