Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC090181.3-201ENST00000624777 1514 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 AL353763.1-201ENST00000624467 1628 ntBASIC6.64□□□□□ -1.35
CISHQ9NSE2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
CISHQ9NSE2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CISHQ9NSE2 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC011504.1-201ENST00000623331 4103 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 RNA5SP279-201ENST00000365513 117 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 RN7SKP86-201ENST00000410454 332 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC092865.3-201ENST00000425390 1026 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AL022319.1-201ENST00000458183 1167 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC073594.1-201ENST00000462065 364 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 PPBPP2-201ENST00000513150 1362 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 TMCC1P1-201ENST00000518897 1980 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AP005136.2-201ENST00000583253 1049 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 SMIM12P1-201ENST00000603004 274 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 AP001823.1-201ENST00000604056 1003 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 uc_338.31-201ENST00000615595 186 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC092724.1-201ENST00000624623 3397 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC111152.1-202ENST00000635848 339 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC116667.2-201ENST00000641075 823 ntBASIC6.63□□□□□ -1.35
CISHQ9NSE2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.63□□□□□ -1.35
CISHQ9NSE2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CISHQ9NSE2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 SHQ1P1-201ENST00000437111 1544 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 RN7SKP144-201ENST00000411108 279 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 RPL7AP14-201ENST00000424041 802 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC108479.1-201ENST00000431142 427 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AL080312.2-201ENST00000613001 630 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 MIR6721-201ENST00000617181 87 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 AL109924.4-201ENST00000623089 670 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC107980.1-201ENST00000558671 3355 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC024651.2-201ENST00000562480 2098 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms