Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHANK3Q9BYB0 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
SHANK3Q9BYB0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
SHANK3Q9BYB0 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.9□□□□□ -1.15
SHANK3Q9BYB0 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHANK3Q9BYB0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
SHANK3Q9BYB0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.9□□□□□ -1.15
SHANK3Q9BYB0 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SHANK3Q9BYB0 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AL807761.1-201ENST00000417622 171 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 RN7SL72P-201ENST00000460697 269 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 RPL10P14-201ENST00000565265 298 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC068870.2-201ENST00000620635 389 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 CU639417.4-201ENST00000623928 207 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 SAMMSON-227ENST00000642114 1199 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC245060.6-201ENST00000624350 8420 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC011379.1-201ENST00000508713 3025 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 U3.2-201ENST00000362981 210 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 RNU105B-201ENST00000364478 208 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 OR2W4P-201ENST00000406496 926 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 RPS12P17-201ENST00000438591 377 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC104164.1-201ENST00000460282 590 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 AC091153.1-201ENST00000466297 402 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 SIAH1P1-201ENST00000479411 923 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 CYCSP22-201ENST00000517555 339 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 IGLV3-30-201ENST00000524362 298 ntBASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK3Q9BYB0 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AC011815.2-201ENST00000618230 2021 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AC110597.1-201ENST00000562669 3176 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 PABPC1P6-201ENST00000445594 1829 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 MAPK10-338ENST00000641647 3362 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 RNA5SP394-201ENST00000364216 119 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 RN7SKP124-201ENST00000364730 341 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AL645927.1-201ENST00000396783 406 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 UBE2V1P14-201ENST00000415815 558 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AC073594.1-201ENST00000462065 364 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 PCNAP4-201ENST00000532690 730 ntBASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK3Q9BYB0 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms