Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 AC068768.2-201ENST00000602352 343 ntBASIC8.96□□□□□ -0.98
SIN3AQ96ST3 AP001823.1-201ENST00000604056 1003 ntBASIC8.96□□□□□ -0.98
SIN3AQ96ST3 AC091167.5-201ENST00000605689 894 ntBASIC8.96□□□□□ -0.98
SIN3AQ96ST3 RN7SL261P-201ENST00000613441 282 ntBASIC8.96□□□□□ -0.98
SIN3AQ96ST3 AL512652.1-201ENST00000619006 500 ntBASIC8.96□□□□□ -0.98
SIN3AQ96ST3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 AC119674.1-213ENST00000641177 1386 ntBASIC8.96□□□□□ -0.98
SIN3AQ96ST3 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SIN3AQ96ST3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC009831.5-201ENST00000624000 3189 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AL096711.1-201ENST00000404780 554 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC116036.1-201ENST00000412199 367 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 PNKDP1-201ENST00000435914 430 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 ZNF619P1-201ENST00000446539 752 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 HMGB1P7-201ENST00000450921 612 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 MAST4-IT1-201ENST00000514241 658 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 CR383658.1-201ENST00000514609 734 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC009879.1-201ENST00000520029 839 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC027667.1-201ENST00000545814 304 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC141002.1-201ENST00000607025 279 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC244517.3-201ENST00000616254 1235 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AL591926.1-201ENST00000620542 217 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SIN3AQ96ST3 NBPF8-201ENST00000583271 5330 ntBASIC8.95□□□□□ -0.98
SIN3AQ96ST3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 PRNCR1-201ENST00000635449 12727 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 SNORA21-201ENST00000362423 132 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 SNORD8-201ENST00000363915 110 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 MIR130B-202ENST00000385018 82 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AP003170.5-201ENST00000397185 335 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 RPL5P7-201ENST00000444235 813 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AC008945.1-201ENST00000505144 499 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AL158068.1-201ENST00000506116 616 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 RNA5SP400-201ENST00000517155 111 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.94□□□□□ -0.98
SIN3AQ96ST3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SIN3AQ96ST3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 AL096829.1-201ENST00000413677 457 ntBASIC8.93□□□□□ -0.98
SIN3AQ96ST3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 RPL24P2-201ENST00000421023 475 ntBASIC8.93□□□□□ -0.98
SIN3AQ96ST3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 AL353662.1-201ENST00000439099 327 ntBASIC8.93□□□□□ -0.98
SIN3AQ96ST3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.93□□□□□ -0.98
SIN3AQ96ST3 AC118758.1-202ENST00000454719 225 ntBASIC8.93□□□□□ -0.98
SIN3AQ96ST3 AP002453.1-201ENST00000492327 668 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms