Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.23□□□□□ -1.25
HPS3Q969F9 AC113191.1-201ENST00000517759 403 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 KCTD9P6-201ENST00000522306 950 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 OR4A46P-201ENST00000527255 933 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 OR4R2P-201ENST00000530815 597 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HPS3Q969F9 AL162632.2-201ENST00000553933 399 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.23□□□□□ -1.25
HPS3Q969F9 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC7.23□□□□□ -1.25
HPS3Q969F9 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.23□□□□□ -1.25
HPS3Q969F9 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.23□□□□□ -1.25
HPS3Q969F9 ARGFXP2-201ENST00000579304 949 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.23□□□□□ -1.25
HPS3Q969F9 AC005479.3-201ENST00000602790 431 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 AC097467.4-201ENST00000605504 141 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 AC073111.2-201ENST00000605657 1075 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.23□□□□□ -1.25
HPS3Q969F9 AC093635.1-201ENST00000609028 555 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.23□□□□□ -1.25
HPS3Q969F9 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.23□□□□□ -1.25
HPS3Q969F9 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
HPS3Q969F9 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HPS3Q969F9 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HPS3Q969F9 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HPS3Q969F9 AC139426.3-201ENST00000605648 2059 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 CCDC150P1-201ENST00000537123 2215 ntBASIC7.23□□□□□ -1.25
HPS3Q969F9 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
HPS3Q969F9 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.22□□□□□ -1.25
HPS3Q969F9 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.22□□□□□ -1.25
HPS3Q969F9 AL353626.3-201ENST00000413399 657 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AL359092.1-201ENST00000417156 265 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.22□□□□□ -1.25
HPS3Q969F9 MTND4LP7-201ENST00000431728 294 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AL451136.1-201ENST00000435399 325 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AL691517.1-201ENST00000440833 1235 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 UBBP5-201ENST00000446970 266 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.22□□□□□ -1.25
HPS3Q969F9 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.22□□□□□ -1.25
HPS3Q969F9 CEACAMP11-201ENST00000455211 583 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 CCNJP2-201ENST00000457810 1163 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 RN7SL267P-201ENST00000485107 261 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 RPL5P33-201ENST00000487833 905 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 MTND3P24-201ENST00000506306 329 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 OR10D4P-201ENST00000525892 951 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 OR9G2P-201ENST00000533326 880 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.22□□□□□ -1.25
HPS3Q969F9 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 AC107993.1-201ENST00000591343 684 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 OR4H6P-202ENST00000603819 340 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 AC025171.4-201ENST00000607250 1047 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 AL356752.1-201ENST00000615844 593 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AC005899.6-201ENST00000620729 297 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AC006249.1-201ENST00000621223 471 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AC135068.11-201ENST00000636378 921 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AL596275.2-208ENST00000641192 594 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 AL121936.2-201ENST00000641935 662 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 MAPK10-357ENST00000641831 2858 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
HPS3Q969F9 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 AC137056.2-201ENST00000624055 1958 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.22□□□□□ -1.25
HPS3Q969F9 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.22□□□□□ -1.25
HPS3Q969F9 AC022507.1-201ENST00000548349 1505 ntBASIC7.22□□□□□ -1.25
HPS3Q969F9 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HPS3Q969F9 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HPS3Q969F9 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.21□□□□□ -1.25
HPS3Q969F9 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
HPS3Q969F9 AC010624.4-201ENST00000597606 1351 ntBASIC7.21□□□□□ -1.25
HPS3Q969F9 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HPS3Q969F9 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HPS3Q969F9 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HPS3Q969F9 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC026310.1-201ENST00000396004 378 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AL034417.1-201ENST00000399343 800 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AL023284.3-201ENST00000407767 334 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 RNA5SP155-201ENST00000411154 129 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 RANP6-201ENST00000413691 644 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AL590762.3-201ENST00000436372 640 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AC074367.1-201ENST00000438685 1125 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 226.8 ms