Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC4Q92889 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC108751.3-201ENST00000461814 1020 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 RPL17P2-201ENST00000491913 451 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 H3F3AP3-201ENST00000497682 407 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 TECRP2-201ENST00000503270 928 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC017007.1-201ENST00000511960 415 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 IGKV1D-32-201ENST00000517449 318 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 PDCL3P1-201ENST00000534575 734 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.47□□□□□ -1.21
ERCC4Q92889 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC4Q92889 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC133794.1-201ENST00000602731 914 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC103564.3-201ENST00000621194 220 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC4Q92889 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
ERCC4Q92889 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
ERCC4Q92889 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
ERCC4Q92889 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC079248.1-201ENST00000427568 1546 ntBASIC7.47□□□□□ -1.21
ERCC4Q92889 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC4Q92889 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC4Q92889 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC4Q92889 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
ERCC4Q92889 MTCO1P4-201ENST00000520516 1409 ntBASIC7.46□□□□□ -1.21
ERCC4Q92889 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.46□□□□□ -1.22
ERCC4Q92889 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
ERCC4Q92889 GCNT6-201ENST00000379591 934 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AL359694.1-201ENST00000403247 604 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AC019205.1-201ENST00000421830 730 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AC073464.3-201ENST00000422564 712 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 MTND4LP14-201ENST00000429447 288 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 FECHP1-201ENST00000431896 1214 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.46□□□□□ -1.22
ERCC4Q92889 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC4Q92889 AC009518.3-201ENST00000438972 253 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.46□□□□□ -1.22
ERCC4Q92889 AL354714.5-201ENST00000450131 590 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 SRP68P2-201ENST00000456184 254 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 RPL31P53-201ENST00000457065 348 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC4Q92889 RNU6-760P-201ENST00000516078 97 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.46□□□□□ -1.22
ERCC4Q92889 AP004607.5-201ENST00000532034 217 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.46□□□□□ -1.22
ERCC4Q92889 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.46□□□□□ -1.22
ERCC4Q92889 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC4Q92889 AL121594.4-201ENST00000556211 1196 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AC106785.3-201ENST00000564064 847 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AC026458.1-201ENST00000564330 438 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.46□□□□□ -1.22
ERCC4Q92889 NPM1P45-201ENST00000583151 559 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.46□□□□□ -1.22
ERCC4Q92889 AF129408.1-201ENST00000608767 431 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 AL356608.1-201ENST00000610034 820 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 CR589904.2-201ENST00000612533 440 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 AL138955.1-201ENST00000622881 1040 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC4Q92889 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC4Q92889 PARP4P1-201ENST00000435945 2337 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 NEK2P2-201ENST00000438441 1338 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 TMCC1P1-201ENST00000518897 1980 ntBASIC7.46□□□□□ -1.22
ERCC4Q92889 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.46□□□□□ -1.22
ERCC4Q92889 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC4Q92889 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC4Q92889 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 AL355377.1-201ENST00000621125 1653 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC4Q92889 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ERCC4Q92889 OR10D1P-201ENST00000355343 936 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ERCC4Q92889 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 SOD1P1-201ENST00000407803 440 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 EEF1B2P8-201ENST00000414101 671 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AL663061.1-201ENST00000416625 580 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AL161742.1-201ENST00000418154 584 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms