Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC092106.2-201ENST00000436597 487 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 LDHAP2-201ENST00000437325 985 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC234771.4-201ENST00000441416 730 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 SETP4-201ENST00000455717 868 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AL445687.2-201ENST00000458156 728 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC063955.1-201ENST00000462872 685 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC022730.1-201ENST00000473114 568 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 SNORA81.2-201ENST00000516868 170 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 RN7SKP64-201ENST00000517206 328 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC009120.3-201ENST00000563335 499 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC092718.4-201ENST00000566639 716 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC036176.3-201ENST00000602456 418 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC114477.1-201ENST00000605097 605 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 U91328.4-201ENST00000608919 517 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 MAPK10-287ENST00000641217 3037 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 SAGE3P-201ENST00000619800 1635 ntBASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTN4IP1Q8WWV3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 RNU11-6P-201ENST00000391127 133 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC245036.1-201ENST00000391727 309 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 RPS19P6-201ENST00000441327 433 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC093870.1-201ENST00000506837 213 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 HNRNPCP1-201ENST00000556181 766 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC026956.1-201ENST00000558741 396 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC027796.1-201ENST00000575593 512 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 AC005899.7-201ENST00000618199 588 ntBASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTN4IP1Q8WWV3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.56
RTN4IP1Q8WWV3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTN4IP1Q8WWV3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTN4IP1Q8WWV3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
RTN4IP1Q8WWV3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RTN4IP1Q8WWV3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RTN4IP1Q8WWV3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTN4IP1Q8WWV3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms