Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC027088.4-201ENST00000611559 1947 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC119674.1-202ENST00000641333 1860 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 SNORA43.1-201ENST00000364863 140 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 OR3A2-201ENST00000408891 1076 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 BX119321.1-201ENST00000428912 797 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 SUMO2P1-206ENST00000445436 284 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 AC092865.4-201ENST00000477936 615 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 AC112191.2-201ENST00000522428 333 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 AP000864.1-201ENST00000609424 650 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 MAPK10-261ENST00000641050 3109 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 AC092821.3-202ENST00000641304 2767 ntBASIC7.54□□□□□ -1.2
SNED1Q8TER0 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.54□□□□□ -1.2
SNED1Q8TER0 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNED1Q8TER0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 AL391422.1-201ENST00000402155 436 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 AC245884.2-201ENST00000426257 404 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 TUBB4BP6-201ENST00000437576 479 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 RANP2-201ENST00000456833 229 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 AC026348.1-201ENST00000462549 1053 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 AL122020.1-201ENST00000472287 459 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 NPM1P27-201ENST00000502784 830 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 SDR42E1P1-201ENST00000611327 477 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 AP002833.3-201ENST00000625075 2265 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNED1Q8TER0 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 272.3 ms