Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AC068408.1-201ENST00000577406 1144 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 RN7SL208P-201ENST00000577964 296 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AL138693.1-201ENST00000622219 129 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 AC140479.4-205ENST00000636339 820 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 CASC19-260ENST00000641828 2001 ntBASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC112Q8NEF3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 RN7SKP189-201ENST00000365042 330 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AL121977.1-201ENST00000401636 979 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 RN7SL868P-201ENST00000485915 303 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 EIF4E2P2-201ENST00000492033 736 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AC096661.1-201ENST00000515870 822 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AC131935.1-201ENST00000524621 333 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 DIMT1P1-201ENST00000603970 763 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AC005753.1-201ENST00000623837 618 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AL035425.4-201ENST00000624509 1063 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 PSMC1P6-201ENST00000477233 1319 ntBASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC112Q8NEF3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 SAGE3P-201ENST00000619800 1635 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 RNA5SP321-201ENST00000362722 111 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 LDHAP5-201ENST00000394996 622 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 EEF1GP6-201ENST00000402309 905 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 RN7SKP268-201ENST00000411107 316 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 YWHAZP5-201ENST00000419975 730 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC013403.1-201ENST00000436954 263 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 PPIAP32-201ENST00000449940 472 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC005517.1-201ENST00000452091 489 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC126615.1-201ENST00000470084 630 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 CYP4F27P-201ENST00000514557 494 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 RNA5SP400-201ENST00000517155 111 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 MIR4800-201ENST00000537353 80 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 CHEK2P2-201ENST00000554701 672 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 ARGFXP2-201ENST00000579304 949 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AP001357.1-201ENST00000586304 1053 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC091133.5-201ENST00000603088 301 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AL109924.4-201ENST00000623089 670 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 GUCY1B2-204ENST00000531898 1979 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms