Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC008429.2-201ENST00000523057 864 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC130366.1-201ENST00000526505 1192 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 RPS4XP21-201ENST00000603814 750 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC091167.5-201ENST00000605689 894 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 SNORD96A-201ENST00000606577 79 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 MIR8082-201ENST00000612488 81 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AP002371.2-201ENST00000624450 503 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC005725.1-201ENST00000577346 2607 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC022417.1-201ENST00000624768 1303 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 RNA5SP442-201ENST00000365050 107 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AL050335.1-201ENST00000396909 869 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 RPL5P20-201ENST00000403848 896 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 MRPL32P1-201ENST00000406301 247 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AL117344.1-201ENST00000407196 616 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AL359092.1-201ENST00000417156 265 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 SETP10-201ENST00000424368 814 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 MGAT2P1-201ENST00000449718 797 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 TPRKBP1-201ENST00000456243 481 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC092451.2-201ENST00000538746 658 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC010287.1-201ENST00000566916 357 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC116165.3-201ENST00000614524 400 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AL391597.1-201ENST00000618707 694 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AL356094.1-201ENST00000624663 1212 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 AC010132.4-201ENST00000569883 1368 ntBASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
CLIP4Q8N3C7 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLIP4Q8N3C7 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6□□□□□ -1.45
CLIP4Q8N3C7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP4Q8N3C7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP4Q8N3C7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP4Q8N3C7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP4Q8N3C7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6□□□□□ -1.45
CLIP4Q8N3C7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6□□□□□ -1.45
CLIP4Q8N3C7 AC089998.1-201ENST00000548575 3141 ntBASIC6□□□□□ -1.45
CLIP4Q8N3C7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP4Q8N3C7 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP4Q8N3C7 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP4Q8N3C7 PPIAP24-201ENST00000328558 471 ntBASIC6□□□□□ -1.45
CLIP4Q8N3C7 AC121334.1-201ENST00000396414 802 ntBASIC6□□□□□ -1.45
CLIP4Q8N3C7 RPL12P23-201ENST00000405880 490 ntBASIC6□□□□□ -1.45
CLIP4Q8N3C7 RNA5SP115-201ENST00000411160 107 ntBASIC6□□□□□ -1.45
CLIP4Q8N3C7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6□□□□□ -1.45
CLIP4Q8N3C7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6□□□□□ -1.45
CLIP4Q8N3C7 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6□□□□□ -1.45
CLIP4Q8N3C7 AL596268.1-201ENST00000427910 1048 ntBASIC6□□□□□ -1.45
CLIP4Q8N3C7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6□□□□□ -1.45
CLIP4Q8N3C7 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6□□□□□ -1.45
CLIP4Q8N3C7 AL500527.1-201ENST00000448532 255 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms