Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 OFD1P17-201ENST00000437639 3018 ntBASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
DEPDC4Q8N2C3 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
DEPDC4Q8N2C3 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
DEPDC4Q8N2C3 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
DEPDC4Q8N2C3 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
DEPDC4Q8N2C3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
DEPDC4Q8N2C3 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
DEPDC4Q8N2C3 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC7.71□□□□□ -1.17
DEPDC4Q8N2C3 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 WASF4P-201ENST00000444248 1494 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 RPL21P132-201ENST00000331267 462 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 RN7SKP226-201ENST00000364912 300 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 MIR1277-201ENST00000408536 78 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 RNU2-42P-201ENST00000410697 113 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC064862.3-201ENST00000411435 571 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AL122008.2-201ENST00000412915 570 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 RPLP1P10-201ENST00000413972 339 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 FMO7P-201ENST00000436045 768 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AL135929.1-201ENST00000449287 552 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 SNRPFP4-201ENST00000456366 242 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 KLF3P2-201ENST00000465138 268 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 RPL30P9-201ENST00000465586 330 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 RPS3AP17-201ENST00000472594 777 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AP005902.2-201ENST00000518393 307 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC138356.2-201ENST00000521192 667 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 CR383656.6-201ENST00000550518 394 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC124947.2-202ENST00000552735 133 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AL352979.1-201ENST00000554238 297 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 CYP4A26P-201ENST00000563017 196 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 GZMB-209ENST00000616551 559 ntTSL 2 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC093909.6-201ENST00000624757 775 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AC118282.4-201ENST00000623090 1712 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 BMS1P1-201ENST00000374336 1332 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms