Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AL683813.2-201ENST00000605245 502 ntBASIC8.3□□□□□ -1.08
CALD1Q05682 AL008723.3-201ENST00000608926 449 ntBASIC8.3□□□□□ -1.08
CALD1Q05682 MIR7159-201ENST00000620587 66 ntBASIC8.3□□□□□ -1.08
CALD1Q05682 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.3□□□□□ -1.08
CALD1Q05682 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.3□□□□□ -1.08
CALD1Q05682 OR7E91P-202ENST00000642062 1198 ntBASIC8.3□□□□□ -1.08
CALD1Q05682 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.3□□□□□ -1.08
CALD1Q05682 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.3□□□□□ -1.08
CALD1Q05682 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
CALD1Q05682 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CALD1Q05682 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.3□□□□□ -1.08
CALD1Q05682 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC8.3□□□□□ -1.08
CALD1Q05682 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.3□□□□□ -1.08
CALD1Q05682 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CALD1Q05682 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.3□□□□□ -1.08
CALD1Q05682 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CALD1Q05682 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CALD1Q05682 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.3□□□□□ -1.08
CALD1Q05682 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CALD1Q05682 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CALD1Q05682 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.29□□□□□ -1.08
CALD1Q05682 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CALD1Q05682 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CALD1Q05682 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CALD1Q05682 RPL11P4-201ENST00000332269 436 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CALD1Q05682 RPSAP32-201ENST00000432681 526 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 SOCS5P1-201ENST00000440415 949 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 RN7SL326P-201ENST00000477493 296 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 LDHBP3-201ENST00000514909 822 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC8.29□□□□□ -1.08
CALD1Q05682 AL121579.2-201ENST00000555466 590 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.29□□□□□ -1.08
CALD1Q05682 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.29□□□□□ -1.08
CALD1Q05682 AC067852.5-201ENST00000589299 310 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 AC005332.4-201ENST00000592752 579 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CALD1Q05682 AC091193.1-201ENST00000604640 448 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 MIR6889-201ENST00000613185 59 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 TCL6_3.1-201ENST00000619064 137 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CALD1Q05682 AC130360.2-201ENST00000533477 1556 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CALD1Q05682 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.29□□□□□ -1.08
CALD1Q05682 AC018765.1-201ENST00000623357 3446 ntBASIC8.29□□□□□ -1.08
CALD1Q05682 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CALD1Q05682 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC8.29□□□□□ -1.08
CALD1Q05682 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.28□□□□□ -1.08
CALD1Q05682 VN1R20P-201ENST00000425215 966 ntBASIC8.28□□□□□ -1.08
CALD1Q05682 YRDCP3-201ENST00000456507 480 ntBASIC8.28□□□□□ -1.08
CALD1Q05682 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8.28□□□□□ -1.08
CALD1Q05682 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC8.28□□□□□ -1.08
CALD1Q05682 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC8.28□□□□□ -1.08
CALD1Q05682 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.28□□□□□ -1.08
CALD1Q05682 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC8.28□□□□□ -1.08
CALD1Q05682 AC005632.2-201ENST00000564271 828 ntBASIC8.28□□□□□ -1.08
CALD1Q05682 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC8.28□□□□□ -1.08
CALD1Q05682 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
CALD1Q05682 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.28□□□□□ -1.08
CALD1Q05682 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CALD1Q05682 AL662795.2-201ENST00000624252 3706 ntBASIC8.28□□□□□ -1.08
CALD1Q05682 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CALD1Q05682 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CALD1Q05682 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.27□□□□□ -1.08
CALD1Q05682 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
CALD1Q05682 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CALD1Q05682 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.27□□□□□ -1.09
CALD1Q05682 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CALD1Q05682 AL391261.1-201ENST00000555712 1479 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CALD1Q05682 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CALD1Q05682 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.27□□□□□ -1.09
CALD1Q05682 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CALD1Q05682 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CALD1Q05682 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CALD1Q05682 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CALD1Q05682 AC112492.2-201ENST00000432774 1030 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 RN7SL552P-201ENST00000462094 276 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 AC005017.1-201ENST00000482002 490 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 OR9A1P-202ENST00000484361 945 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 RN7SL362P-201ENST00000494228 267 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 AL117692.1-201ENST00000494283 713 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.27□□□□□ -1.09
CALD1Q05682 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.27□□□□□ -1.09
CALD1Q05682 MIR4301-201ENST00000577203 66 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 uc_338.29-201ENST00000615099 168 ntBASIC8.27□□□□□ -1.09
CALD1Q05682 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms