Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL20P78556 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCL20P78556 AC027216.1-201ENST00000577726 685 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL20P78556 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL20P78556 AL589765.5-201ENST00000596133 515 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AC104117.5-201ENST00000606195 547 ntBASIC4.81□□□□□ -1.64
CCL20P78556 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AC022400.9-201ENST00000623633 273 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AL035425.4-201ENST00000624509 1063 ntBASIC4.81□□□□□ -1.64
CCL20P78556 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 UGT2B24P-201ENST00000514441 1597 ntBASIC4.81□□□□□ -1.64
CCL20P78556 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL20P78556 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL20P78556 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL20P78556 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCL20P78556 AC018809.2-201ENST00000602436 3823 ntBASIC4.81□□□□□ -1.64
CCL20P78556 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL20P78556 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CCL20P78556 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL20P78556 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL20P78556 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCL20P78556 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCL20P78556 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 SNORD35A-201ENST00000363389 86 ntBASIC4.8□□□□□ -1.64
CCL20P78556 RNU12-2P-201ENST00000364789 156 ntBASIC4.8□□□□□ -1.64
CCL20P78556 RN7SKP189-201ENST00000365042 330 ntBASIC4.8□□□□□ -1.64
CCL20P78556 AC074375.1-201ENST00000372993 192 ntBASIC4.8□□□□□ -1.64
CCL20P78556 AL590635.1-201ENST00000406314 586 ntBASIC4.8□□□□□ -1.64
CCL20P78556 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCL20P78556 AC245096.1-201ENST00000413104 546 ntBASIC4.8□□□□□ -1.64
CCL20P78556 PTCD2P2-201ENST00000415579 1095 ntBASIC4.8□□□□□ -1.64
CCL20P78556 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL20P78556 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL20P78556 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL20P78556 BSNDP4-201ENST00000436076 388 ntBASIC4.8□□□□□ -1.64
CCL20P78556 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL20P78556 RANP2-201ENST00000456833 229 ntBASIC4.8□□□□□ -1.64
CCL20P78556 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 AC016489.1-201ENST00000461109 375 ntBASIC4.8□□□□□ -1.64
CCL20P78556 RN7SL308P-201ENST00000464971 297 ntBASIC4.8□□□□□ -1.64
CCL20P78556 RN7SL228P-201ENST00000470060 303 ntBASIC4.8□□□□□ -1.64
CCL20P78556 RN7SL282P-201ENST00000479676 297 ntBASIC4.8□□□□□ -1.64
CCL20P78556 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 RN7SL239P-201ENST00000490061 300 ntBASIC4.8□□□□□ -1.64
CCL20P78556 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 AC105420.1-201ENST00000504389 582 ntBASIC4.8□□□□□ -1.64
CCL20P78556 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL20P78556 AC021820.1-201ENST00000525564 808 ntBASIC4.8□□□□□ -1.64
CCL20P78556 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL20P78556 NDUFA3P2-201ENST00000531434 232 ntBASIC4.8□□□□□ -1.64
CCL20P78556 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL20P78556 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL20P78556 AC126615.2-201ENST00000553003 515 ntBASIC4.8□□□□□ -1.64
CCL20P78556 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL20P78556 TPRX1P1-201ENST00000557620 319 ntBASIC4.8□□□□□ -1.64
CCL20P78556 AC093524.1-201ENST00000564266 1094 ntBASIC4.8□□□□□ -1.64
CCL20P78556 ZNF322P1-201ENST00000568013 1209 ntBASIC4.8□□□□□ -1.64
CCL20P78556 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL20P78556 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC4.8□□□□□ -1.64
CCL20P78556 AC015712.7-201ENST00000615211 635 ntBASIC4.8□□□□□ -1.64
CCL20P78556 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 AC063952.1-203ENST00000634410 658 ntBASIC4.8□□□□□ -1.64
CCL20P78556 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL20P78556 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL20P78556 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL20P78556 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
CCL20P78556 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCL20P78556 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL20P78556 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL20P78556 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL20P78556 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms