Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
NUP98P52948 PDZK1P1-202ENST00000425209 1350 ntBASIC7.62□□□□□ -1.19
NUP98P52948 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.62□□□□□ -1.19
NUP98P52948 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.62□□□□□ -1.19
NUP98P52948 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
NUP98P52948 FUNDC2P3-201ENST00000334716 533 ntBASIC7.62□□□□□ -1.19
NUP98P52948 OR7E101P-201ENST00000400428 513 ntBASIC7.62□□□□□ -1.19
NUP98P52948 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.62□□□□□ -1.19
NUP98P52948 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.62□□□□□ -1.19
NUP98P52948 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.62□□□□□ -1.19
NUP98P52948 BZW1P1-201ENST00000454901 1240 ntBASIC7.62□□□□□ -1.19
NUP98P52948 SNORA70.20-201ENST00000516848 126 ntBASIC7.62□□□□□ -1.19
NUP98P52948 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.62□□□□□ -1.19
NUP98P52948 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.62□□□□□ -1.19
NUP98P52948 DPPA2P4-201ENST00000563717 878 ntBASIC7.62□□□□□ -1.19
NUP98P52948 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 AC015802.2-201ENST00000589690 189 ntBASIC7.62□□□□□ -1.19
NUP98P52948 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.62□□□□□ -1.19
NUP98P52948 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.62□□□□□ -1.19
NUP98P52948 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.61□□□□□ -1.19
NUP98P52948 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 PARP4P1-201ENST00000435945 2337 ntBASIC7.61□□□□□ -1.19
NUP98P52948 NEPNP-201ENST00000404786 1371 ntBASIC7.61□□□□□ -1.19
NUP98P52948 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
NUP98P52948 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.61□□□□□ -1.19
NUP98P52948 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
NUP98P52948 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.61□□□□□ -1.19
NUP98P52948 RPL34P3-201ENST00000421454 338 ntBASIC7.61□□□□□ -1.19
NUP98P52948 AC127526.2-201ENST00000426436 775 ntBASIC7.61□□□□□ -1.19
NUP98P52948 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.61□□□□□ -1.19
NUP98P52948 AC002504.1-201ENST00000438281 691 ntBASIC7.61□□□□□ -1.19
NUP98P52948 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.61□□□□□ -1.19
NUP98P52948 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.61□□□□□ -1.19
NUP98P52948 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.61□□□□□ -1.19
NUP98P52948 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
NUP98P52948 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
NUP98P52948 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
NUP98P52948 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.6□□□□□ -1.19
NUP98P52948 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.6□□□□□ -1.19
NUP98P52948 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.6□□□□□ -1.19
NUP98P52948 BMS1P17-202ENST00000416720 316 ntBASIC7.6□□□□□ -1.19
NUP98P52948 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.6□□□□□ -1.19
NUP98P52948 BX119321.1-201ENST00000428912 797 ntBASIC7.6□□□□□ -1.19
NUP98P52948 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.6□□□□□ -1.19
NUP98P52948 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 DNAJC19P5-201ENST00000443295 316 ntBASIC7.6□□□□□ -1.19
NUP98P52948 AC093166.4-201ENST00000457867 318 ntBASIC7.6□□□□□ -1.19
NUP98P52948 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.6□□□□□ -1.19
NUP98P52948 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 SNORD95-201ENST00000579879 68 ntBASIC7.6□□□□□ -1.19
NUP98P52948 AL512624.1-201ENST00000613638 469 ntBASIC7.6□□□□□ -1.19
NUP98P52948 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
NUP98P52948 AC022919.1-201ENST00000624979 626 ntBASIC7.6□□□□□ -1.19
NUP98P52948 AC003992.1-201ENST00000635364 557 ntBASIC7.6□□□□□ -1.19
NUP98P52948 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.6□□□□□ -1.19
NUP98P52948 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NUP98P52948 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.6□□□□□ -1.19
NUP98P52948 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.6□□□□□ -1.19
NUP98P52948 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NUP98P52948 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.59□□□□□ -1.19
NUP98P52948 RNA5SP46-201ENST00000362370 120 ntBASIC7.59□□□□□ -1.19
NUP98P52948 RNA5SP350-201ENST00000363298 111 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 959.5 ms