Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.55□□□□□ -1.36
HTTP42858 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.55□□□□□ -1.36
HTTP42858 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.55□□□□□ -1.36
HTTP42858 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.55□□□□□ -1.36
HTTP42858 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HTTP42858 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC6.55□□□□□ -1.36
HTTP42858 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
HTTP42858 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HTTP42858 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC6.55□□□□□ -1.36
HTTP42858 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HTTP42858 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HTTP42858 PRELID1P2-201ENST00000407805 396 ntBASIC6.55□□□□□ -1.36
HTTP42858 AC099677.3-201ENST00000427081 395 ntBASIC6.55□□□□□ -1.36
HTTP42858 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.55□□□□□ -1.36
HTTP42858 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 MIR3934-201ENST00000579806 107 ntBASIC6.55□□□□□ -1.36
HTTP42858 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.55□□□□□ -1.36
HTTP42858 AP002505.2-201ENST00000623585 696 ntBASIC6.55□□□□□ -1.36
HTTP42858 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
HTTP42858 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
HTTP42858 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 AC002090.1-201ENST00000625000 2138 ntBASIC6.55□□□□□ -1.36
HTTP42858 AC105749.1-201ENST00000631338 2008 ntBASIC6.55□□□□□ -1.36
HTTP42858 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HTTP42858 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 RNU11-6P-201ENST00000391127 133 ntBASIC6.54□□□□□ -1.36
HTTP42858 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.54□□□□□ -1.36
HTTP42858 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 AC020898.1-201ENST00000474167 787 ntBASIC6.54□□□□□ -1.36
HTTP42858 AC010343.2-201ENST00000510162 224 ntBASIC6.54□□□□□ -1.36
HTTP42858 AC147055.3-201ENST00000510547 851 ntBASIC6.54□□□□□ -1.36
HTTP42858 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.54□□□□□ -1.36
HTTP42858 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.54□□□□□ -1.36
HTTP42858 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.54□□□□□ -1.36
HTTP42858 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.54□□□□□ -1.36
HTTP42858 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.54□□□□□ -1.36
HTTP42858 RPS3AP53-201ENST00000454716 778 ntBASIC6.54□□□□□ -1.36
HTTP42858 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
HTTP42858 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
HTTP42858 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC6.54□□□□□ -1.36
HTTP42858 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.54□□□□□ -1.36
HTTP42858 AC027279.1-201ENST00000568885 4284 ntBASIC6.54□□□□□ -1.36
HTTP42858 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.54□□□□□ -1.36
HTTP42858 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HTTP42858 AC087516.1-201ENST00000561236 2428 ntBASIC6.54□□□□□ -1.36
HTTP42858 DUTP4-201ENST00000424782 475 ntBASIC6.54□□□□□ -1.36
HTTP42858 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.54□□□□□ -1.36
HTTP42858 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.54□□□□□ -1.36
HTTP42858 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.54□□□□□ -1.36
HTTP42858 BRD9P1-201ENST00000529855 560 ntBASIC6.54□□□□□ -1.36
HTTP42858 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 OR7A11P-201ENST00000597719 953 ntBASIC6.54□□□□□ -1.36
HTTP42858 AL133406.3-201ENST00000606817 541 ntBASIC6.54□□□□□ -1.36
HTTP42858 MIR7641-1-201ENST00000627518 61 ntBASIC6.54□□□□□ -1.36
HTTP42858 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HTTP42858 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.54□□□□□ -1.36
HTTP42858 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.54□□□□□ -1.36
HTTP42858 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HTTP42858 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 AL121768.1-201ENST00000613917 2544 ntBASIC6.53□□□□□ -1.36
HTTP42858 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms