Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
ERCC3P19447 NBPF8-201ENST00000583271 5330 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
ERCC3P19447 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.26□□□□□ -1.09
ERCC3P19447 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 NAMPTP1-201ENST00000440465 2514 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 KARSP1-201ENST00000451871 1752 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.26□□□□□ -1.09
ERCC3P19447 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.26□□□□□ -1.09
ERCC3P19447 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 RPL12P1-201ENST00000374520 498 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 U6.112-201ENST00000384129 70 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 MIR152-201ENST00000385212 87 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 RNA5SP105-201ENST00000391123 113 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 LDHAP5-201ENST00000394996 622 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 AC099535.1-201ENST00000408928 371 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 Z82198.3-201ENST00000421145 199 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.26□□□□□ -1.09
ERCC3P19447 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.26□□□□□ -1.09
ERCC3P19447 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC8.26□□□□□ -1.09
ERCC3P19447 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.26□□□□□ -1.09
ERCC3P19447 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 CREM-220ENST00000463314 964 ntTSL 2 BASIC8.26□□□□□ -1.09
ERCC3P19447 RN7SL751P-201ENST00000473281 284 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.26□□□□□ -1.09
ERCC3P19447 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.26□□□□□ -1.09
ERCC3P19447 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC8.26□□□□□ -1.09
ERCC3P19447 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC8.26□□□□□ -1.09
ERCC3P19447 AL132657.2-201ENST00000564417 358 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 RN7SL66P-201ENST00000582099 264 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.26□□□□□ -1.09
ERCC3P19447 AC023513.1-201ENST00000604396 691 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 CR382285.1-202ENST00000604687 547 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC8.26□□□□□ -1.09
ERCC3P19447 AC099667.1-201ENST00000624222 469 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
ERCC3P19447 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
ERCC3P19447 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.26□□□□□ -1.09
ERCC3P19447 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ERCC3P19447 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.26□□□□□ -1.09
ERCC3P19447 MFSD8-217ENST00000641178 4374 ntBASIC8.26□□□□□ -1.09
ERCC3P19447 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 AC079178.2-201ENST00000439323 1624 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.25□□□□□ -1.09
ERCC3P19447 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.25□□□□□ -1.09
ERCC3P19447 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.25□□□□□ -1.09
ERCC3P19447 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
ERCC3P19447 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.25□□□□□ -1.09
ERCC3P19447 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
ERCC3P19447 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.25□□□□□ -1.09
ERCC3P19447 RNA5SP472-201ENST00000363868 119 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AC092634.1-201ENST00000366505 199 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.25□□□□□ -1.09
ERCC3P19447 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
ERCC3P19447 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
ERCC3P19447 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
ERCC3P19447 SNORA11.5-201ENST00000408163 128 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AC017035.1-201ENST00000411999 1115 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 Z68694.1-201ENST00000413929 841 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 SNRPEP5-201ENST00000425442 278 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AC005189.1-201ENST00000431286 310 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC8.25□□□□□ -1.09
ERCC3P19447 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ERCC3P19447 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.25□□□□□ -1.09
ERCC3P19447 RPL5P4-201ENST00000434805 886 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AC009518.3-201ENST00000438972 253 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 RPL12P49-201ENST00000441100 121 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 OR10R1P-201ENST00000441524 1141 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.25□□□□□ -1.09
ERCC3P19447 Z95152.1-201ENST00000453556 656 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.25□□□□□ -1.09
ERCC3P19447 RPSAP7-201ENST00000456871 885 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 RN7SL325P-201ENST00000460434 283 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AC117395.2-201ENST00000463122 1128 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 DCAF13P2-201ENST00000514188 555 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC8.25□□□□□ -1.09
ERCC3P19447 OR5M6P-201ENST00000530227 937 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.25□□□□□ -1.09
ERCC3P19447 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.25□□□□□ -1.09
ERCC3P19447 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.25□□□□□ -1.09
ERCC3P19447 AC138207.8-204ENST00000579588 527 ntBASIC8.25□□□□□ -1.09
ERCC3P19447 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.25□□□□□ -1.09
ERCC3P19447 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC8.25□□□□□ -1.09
ERCC3P19447 DUXAP3-201ENST00000603616 594 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms