Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FTLP8-201ENST00000446770 267 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGA1P17096 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGA1P17096 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGA1P17096 AC068305.2-201ENST00000550567 1205 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.46□□□□□ -1.38
HMGA1P17096 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.46□□□□□ -1.38
HMGA1P17096 RPA2P1-201ENST00000556557 721 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGA1P17096 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGA1P17096 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGA1P17096 MIR3189-201ENST00000578735 73 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 AL513218.1-201ENST00000606527 391 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 AC108673.3-201ENST00000609183 335 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 AP002345.2-201ENST00000609961 904 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGA1P17096 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
HMGA1P17096 AL355480.1-201ENST00000629041 99 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGA1P17096 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
HMGA1P17096 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
HMGA1P17096 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.46□□□□□ -1.38
HMGA1P17096 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGA1P17096 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGA1P17096 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
HMGA1P17096 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
HMGA1P17096 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
HMGA1P17096 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 AC009135.2-201ENST00000624136 1768 ntBASIC6.45□□□□□ -1.38
HMGA1P17096 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HMGA1P17096 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 MIR433-201ENST00000384837 93 ntBASIC6.45□□□□□ -1.38
HMGA1P17096 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGA1P17096 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGA1P17096 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGA1P17096 RPA2P3-201ENST00000533268 770 ntBASIC6.45□□□□□ -1.38
HMGA1P17096 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGA1P17096 AC245014.3-201ENST00000618589 347 ntBASIC6.45□□□□□ -1.38
HMGA1P17096 AL136228.1-201ENST00000622221 319 ntBASIC6.45□□□□□ -1.38
HMGA1P17096 AC129778.1-202ENST00000623812 261 ntBASIC6.45□□□□□ -1.38
HMGA1P17096 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 AL591379.1-207ENST00000635982 261 ntBASIC6.45□□□□□ -1.38
HMGA1P17096 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.45□□□□□ -1.38
HMGA1P17096 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGA1P17096 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HMGA1P17096 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGA1P17096 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGA1P17096 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.44□□□□□ -1.38
HMGA1P17096 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.44□□□□□ -1.38
HMGA1P17096 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
HMGA1P17096 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGA1P17096 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 AC009237.1-201ENST00000442127 744 ntBASIC6.44□□□□□ -1.38
HMGA1P17096 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGA1P17096 AC073109.1-201ENST00000445066 978 ntBASIC6.44□□□□□ -1.38
HMGA1P17096 ZNF619P1-201ENST00000446539 752 ntBASIC6.44□□□□□ -1.38
HMGA1P17096 AC005077.1-201ENST00000449226 375 ntBASIC6.44□□□□□ -1.38
HMGA1P17096 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.44□□□□□ -1.38
HMGA1P17096 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGA1P17096 Y_RNA.667-201ENST00000516212 107 ntBASIC6.44□□□□□ -1.38
HMGA1P17096 RNA5SP438-201ENST00000516561 112 ntBASIC6.44□□□□□ -1.38
HMGA1P17096 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGA1P17096 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HMGA1P17096 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGA1P17096 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.44□□□□□ -1.38
HMGA1P17096 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 MIR3614-201ENST00000581261 86 ntBASIC6.44□□□□□ -1.38
HMGA1P17096 AC090236.2-201ENST00000587933 1101 ntBASIC6.44□□□□□ -1.38
HMGA1P17096 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGA1P17096 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 MIR6809-201ENST00000612189 116 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms