Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM1P09493 AC095038.1-201ENST00000429248 1591 ntBASIC6.91□□□□□ -1.3
TPM1P09493 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.9□□□□□ -1.3
TPM1P09493 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 AC096921.2-201ENST00000561507 1916 ntBASIC6.9□□□□□ -1.3
TPM1P09493 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 AC239868.2-201ENST00000564237 4527 ntBASIC6.9□□□□□ -1.3
TPM1P09493 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
TPM1P09493 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 MRPS6P2-201ENST00000381143 370 ntBASIC6.9□□□□□ -1.3
TPM1P09493 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TPM1P09493 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 NPM1P37-201ENST00000403105 874 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AL096800.1-201ENST00000405326 893 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AL590635.1-201ENST00000406314 586 ntBASIC6.9□□□□□ -1.3
TPM1P09493 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM1P09493 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM1P09493 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.9□□□□□ -1.3
TPM1P09493 AC092651.1-201ENST00000426110 312 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM1P09493 RPL5P15-201ENST00000475870 897 ntBASIC6.9□□□□□ -1.3
TPM1P09493 OR9A1P-202ENST00000484361 945 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AF305872.1-201ENST00000485217 471 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.9□□□□□ -1.3
TPM1P09493 RPL7L1P7-201ENST00000509986 724 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AC097486.1-201ENST00000515331 210 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.9□□□□□ -1.3
TPM1P09493 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.9□□□□□ -1.3
TPM1P09493 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.9□□□□□ -1.3
TPM1P09493 MIR3189-201ENST00000578735 73 ntBASIC6.9□□□□□ -1.3
TPM1P09493 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM1P09493 GLYATL1P2-202ENST00000588046 902 ntBASIC6.9□□□□□ -1.3
TPM1P09493 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM1P09493 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM1P09493 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 AC097641.3-201ENST00000613523 464 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.9□□□□□ -1.3
TPM1P09493 AL157762.1-201ENST00000619612 415 ntBASIC6.9□□□□□ -1.3
TPM1P09493 AC069234.4-201ENST00000621276 412 ntBASIC6.9□□□□□ -1.3
TPM1P09493 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TPM1P09493 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.9□□□□□ -1.31
TPM1P09493 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TPM1P09493 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TPM1P09493 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TPM1P09493 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
TPM1P09493 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TPM1P09493 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.9□□□□□ -1.31
TPM1P09493 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.89□□□□□ -1.31
TPM1P09493 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.89□□□□□ -1.31
TPM1P09493 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 PPIAP24-201ENST00000328558 471 ntBASIC6.89□□□□□ -1.31
TPM1P09493 AC121334.1-201ENST00000396414 802 ntBASIC6.89□□□□□ -1.31
TPM1P09493 AL121977.1-201ENST00000401636 979 ntBASIC6.89□□□□□ -1.31
TPM1P09493 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 AL354868.1-201ENST00000417077 482 ntBASIC6.89□□□□□ -1.31
TPM1P09493 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
TPM1P09493 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.89□□□□□ -1.31
TPM1P09493 GRPEL2P2-201ENST00000421856 670 ntBASIC6.89□□□□□ -1.31
TPM1P09493 RPL3P11-201ENST00000434028 1146 ntBASIC6.89□□□□□ -1.31
TPM1P09493 RPS27AP3-201ENST00000453803 454 ntBASIC6.89□□□□□ -1.31
TPM1P09493 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.89□□□□□ -1.31
TPM1P09493 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.89□□□□□ -1.31
TPM1P09493 HNRNPCP8-201ENST00000528764 888 ntBASIC6.89□□□□□ -1.31
TPM1P09493 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.89□□□□□ -1.31
TPM1P09493 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.89□□□□□ -1.31
TPM1P09493 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.89□□□□□ -1.31
TPM1P09493 MIR4312-201ENST00000579909 76 ntBASIC6.89□□□□□ -1.31
TPM1P09493 AF186192.2-204ENST00000581667 524 ntBASIC6.89□□□□□ -1.31
TPM1P09493 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.89□□□□□ -1.31
TPM1P09493 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.89□□□□□ -1.31
TPM1P09493 AC125494.2-201ENST00000602431 657 ntBASIC6.89□□□□□ -1.31
TPM1P09493 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.89□□□□□ -1.31
TPM1P09493 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.89□□□□□ -1.31
TPM1P09493 AC006924.1-201ENST00000610750 559 ntBASIC6.89□□□□□ -1.31
TPM1P09493 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.89□□□□□ -1.31
TPM1P09493 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
TPM1P09493 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
TPM1P09493 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.89□□□□□ -1.31
TPM1P09493 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TPM1P09493 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
TPM1P09493 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TPM1P09493 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TPM1P09493 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms