Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.98□□□□□ -1.45
SCN2BO60939 AC114728.1-201ENST00000488289 483 ntBASIC5.98□□□□□ -1.45
SCN2BO60939 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.98□□□□□ -1.45
SCN2BO60939 AC018639.1-201ENST00000492994 442 ntBASIC5.98□□□□□ -1.45
SCN2BO60939 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.98□□□□□ -1.45
SCN2BO60939 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN2BO60939 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN2BO60939 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN2BO60939 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN2BO60939 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.98□□□□□ -1.45
SCN2BO60939 AL589863.1-201ENST00000595383 631 ntBASIC5.98□□□□□ -1.45
SCN2BO60939 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.98□□□□□ -1.45
SCN2BO60939 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN2BO60939 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.98□□□□□ -1.45
SCN2BO60939 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN2BO60939 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SCN2BO60939 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCN2BO60939 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCN2BO60939 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN2BO60939 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN2BO60939 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN2BO60939 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN2BO60939 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 HDAC1P2-201ENST00000453661 1398 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN2BO60939 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN2BO60939 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
SCN2BO60939 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SCN2BO60939 RNU1-84P-201ENST00000365447 164 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 AC092634.1-201ENST00000366505 199 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SCN2BO60939 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 ZNF37CP-201ENST00000406795 241 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN2BO60939 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 RN7SL83P-201ENST00000468131 297 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 AL035690.1-201ENST00000490892 383 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SCN2BO60939 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN2BO60939 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC009729.1-201ENST00000548873 1133 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC090651.1-201ENST00000567865 634 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 AC027229.1-201ENST00000583887 253 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 MIR3159-201ENST00000584572 74 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.97□□□□□ -1.45
SCN2BO60939 NPIPB1P-202ENST00000588786 828 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN2BO60939 MIR6883-201ENST00000614952 78 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SCN2BO60939 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 MTND5P12-201ENST00000502851 1449 ntBASIC5.97□□□□□ -1.45
SCN2BO60939 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN2BO60939 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN2BO60939 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.96□□□□□ -1.45
SCN2BO60939 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.96□□□□□ -1.45
SCN2BO60939 AL136984.1-201ENST00000607611 1893 ntBASIC5.96□□□□□ -1.45
SCN2BO60939 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.96□□□□□ -1.45
SCN2BO60939 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.96□□□□□ -1.45
SCN2BO60939 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.96□□□□□ -1.45
SCN2BO60939 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SCN2BO60939 USP9YP3-201ENST00000434481 1766 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 AP001541.1-201ENST00000623322 1904 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN2BO60939 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 MIR433-201ENST00000384837 93 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SCN2BO60939 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms