Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.82□□□□□ -1.48
ZIC3O60481 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.82□□□□□ -1.48
ZIC3O60481 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 AC011455.2-201ENST00000599320 3336 ntBASIC5.82□□□□□ -1.48
ZIC3O60481 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.82□□□□□ -1.48
ZIC3O60481 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZIC3O60481 AC062029.1-202ENST00000606164 3651 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 PPBPP2-201ENST00000513150 1362 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ZIC3O60481 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.81□□□□□ -1.48
ZIC3O60481 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ZIC3O60481 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ZIC3O60481 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.81□□□□□ -1.48
ZIC3O60481 RN7SKP171-201ENST00000364417 303 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 AL050335.1-201ENST00000396909 869 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC002127.1-201ENST00000421305 225 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 AC007064.3-201ENST00000422608 359 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 AL157884.1-201ENST00000424561 454 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 AL590623.1-201ENST00000427864 105 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 MTCO1P57-201ENST00000432182 261 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 RPSAP32-201ENST00000432681 526 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 MTND4P15-201ENST00000437913 1033 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.81□□□□□ -1.48
ZIC3O60481 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 NPM1P27-201ENST00000502784 830 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.81□□□□□ -1.48
ZIC3O60481 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 CYCSP25-201ENST00000525280 316 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.81□□□□□ -1.48
ZIC3O60481 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.81□□□□□ -1.48
ZIC3O60481 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.81□□□□□ -1.48
ZIC3O60481 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.81□□□□□ -1.48
ZIC3O60481 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 AL589863.1-201ENST00000595383 631 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
ZIC3O60481 uc_338.29-201ENST00000615099 168 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
ZIC3O60481 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.81□□□□□ -1.48
ZIC3O60481 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.81□□□□□ -1.48
ZIC3O60481 AP002370.1-201ENST00000528055 1602 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZIC3O60481 TNPO1P2-201ENST00000426249 2665 ntBASIC5.81□□□□□ -1.48
ZIC3O60481 MTND4P21-201ENST00000453886 1357 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AC114876.1-201ENST00000490962 1366 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.8□□□□□ -1.48
ZIC3O60481 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 AC090181.3-201ENST00000624777 1514 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 OR52B5P-204ENST00000641744 3467 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms