Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.66□□□□□ -1.34
CCM2LQ9NUG4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.66□□□□□ -1.34
CCM2LQ9NUG4 AC122713.2-201ENST00000624942 3335 ntBASIC6.66□□□□□ -1.34
CCM2LQ9NUG4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCM2LQ9NUG4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.66□□□□□ -1.34
CCM2LQ9NUG4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RNA5SP333-201ENST00000363466 118 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RN7SKP107-201ENST00000364157 290 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RN7SKP28-201ENST00000364770 305 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RNA5SP334-201ENST00000364825 118 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 OR13C3-201ENST00000374781 1108 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RPL9P21-201ENST00000392269 505 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 NPM1P37-201ENST00000403105 874 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 SNORA11D-201ENST00000408548 128 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 SNORA11E-201ENST00000408778 128 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RNU2-18P-201ENST00000411224 162 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RPS21P8-201ENST00000413365 247 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 PPIAP30-201ENST00000415473 519 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 OR51A6P-201ENST00000418680 1004 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 MTND1P26-201ENST00000440488 538 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC013429.1-201ENST00000456604 422 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AL928654.1-201ENST00000476081 354 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 SYT14P1-201ENST00000481459 721 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 OR5H3P-201ENST00000502817 919 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 RFPL4AP3-201ENST00000515267 345 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC034205.1-201ENST00000520621 638 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 DNM1P31-201ENST00000564149 696 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 MIR4509-3-201ENST00000578671 94 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 MIR4509-2-201ENST00000583920 94 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC104184.1-201ENST00000607513 721 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC140725.3-201ENST00000616193 880 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 MIR4509-1-201ENST00000618224 94 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC021422.1-201ENST00000621212 473 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AL162377.2-201ENST00000624532 337 ntBASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCM2LQ9NUG4 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 NEK2P4-201ENST00000425793 1329 ntBASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 AL512310.3-201ENST00000547023 1335 ntBASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.35
CCM2LQ9NUG4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AL136531.3-201ENST00000624378 3658 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 RNU5E-10P-201ENST00000363506 118 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 RNA5SP238-201ENST00000365464 120 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AC007618.1-201ENST00000366455 732 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AC234772.1-201ENST00000377927 937 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AL034417.1-201ENST00000399343 800 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 TYMSP1-201ENST00000407851 869 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 SNORA11.3-201ENST00000408471 128 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 CBX1P3-201ENST00000413296 527 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 TCEA1P2-201ENST00000420496 906 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 TAS2R2P-201ENST00000421146 910 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AC027124.1-201ENST00000440852 466 ntBASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.64□□□□□ -1.35
CCM2LQ9NUG4 MTCYBP21-201ENST00000443300 1113 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms