Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AL355355.1-201ENST00000442900 793 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 SNX18P26-201ENST00000458433 740 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 RPS3AP49-201ENST00000472161 790 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC074386.1-206ENST00000487102 761 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 RPL17P2-201ENST00000491913 451 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 RPL5P14-201ENST00000494197 878 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 RPL19P11-201ENST00000495944 589 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC105420.1-201ENST00000504389 582 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AP005639.1-201ENST00000526939 192 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AP003168.1-201ENST00000530091 307 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AP004607.5-201ENST00000532034 217 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC073916.1-201ENST00000545095 130 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 RN7SL657P-201ENST00000582431 293 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 RPL7AP69-201ENST00000595306 806 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 MRPL57P1-201ENST00000621486 265 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AP001885.1-201ENST00000621658 558 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 AC027559.1-201ENST00000636288 271 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 BX284613.1-201ENST00000452221 1641 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 DDX18P6-201ENST00000450119 1997 ntBASIC6.24□□□□□ -1.41
BRF2Q9HAW0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
BRF2Q9HAW0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 MIR365B-201ENST00000362317 111 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 RNA5SP140-201ENST00000364524 92 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 MIR27A-201ENST00000385073 78 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 RAB5CP1-201ENST00000395972 580 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AP003170.5-201ENST00000397185 335 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 RANP6-201ENST00000413691 644 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 RPS10P14-201ENST00000440748 502 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 CCNJP1-201ENST00000450600 1149 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC025181.1-201ENST00000477507 416 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC022415.1-202ENST00000486612 523 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC005519.1-201ENST00000554490 601 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC027281.1-201ENST00000574178 758 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC233702.7-202ENST00000582941 211 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 KATNBL1P1-201ENST00000605192 748 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 SNORD96A-201ENST00000606577 79 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AL162574.2-201ENST00000614618 657 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 AC092111.2-201ENST00000611627 1414 ntBASIC6.23□□□□□ -1.41
BRF2Q9HAW0 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms