Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 AL121839.1-201ENST00000556233 1185 ntBASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 AC026956.1-201ENST00000558741 396 ntBASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 AP002884.5-201ENST00000595053 1132 ntBASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 AC015819.1-201ENST00000613588 663 ntBASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
CHMP4AQ9BY43 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 RAD17P2-201ENST00000451754 1977 ntBASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 CASC19-243ENST00000641588 1546 ntBASIC8.46□□□□□ -1.05
CHMP4AQ9BY43 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AL391419.1-201ENST00000398901 1275 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 FAM183DP-201ENST00000421987 399 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 CLNS1AP1-201ENST00000435954 682 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 RPL19P11-201ENST00000495944 589 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 MTND6P8-201ENST00000503471 522 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 BTG1P1-201ENST00000540396 508 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AL356986.1-201ENST00000604085 341 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 LSM1P2-201ENST00000604911 322 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AL158062.1-201ENST00000619632 745 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 MTCO1P1-201ENST00000624263 1081 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 OLMALINC-203ENST00000641087 3779 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AC062022.1-201ENST00000451026 1684 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 FO082842.1-201ENST00000423552 1370 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 AC092821.2-201ENST00000545710 2042 ntBASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4AQ9BY43 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 U3.52-201ENST00000384034 216 ntBASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 MIR640-201ENST00000385086 96 ntBASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 CCL7-202ENST00000394627 696 ntTSL 3 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 CYCSP52-201ENST00000422857 310 ntBASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 AL139156.3-201ENST00000454802 394 ntBASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 AC098583.1-201ENST00000480875 255 ntBASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 RN7SKP34-201ENST00000516142 244 ntBASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 SNORA74.1-201ENST00000516320 180 ntBASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 MT1CP-201ENST00000567054 174 ntBASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.45□□□□□ -1.06
CHMP4AQ9BY43 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 716.8 ms