Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 GAPDHP16-201ENST00000448152 962 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 RBMY3AP-201ENST00000449381 1145 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 EIF2S2P4-201ENST00000461070 984 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC106785.4-201ENST00000569492 412 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC091057.2-201ENST00000602594 792 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC080013.6-201ENST00000606185 215 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC112694.2-201ENST00000623697 768 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC099654.8-201ENST00000637757 681 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC013437.2-201ENST00000639587 677 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 CASC19-222ENST00000641321 1173 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 BRD7P1-201ENST00000557705 1915 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AP005139.1-201ENST00000580702 1647 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 RNA5SP140-201ENST00000364524 92 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 RNY3P9-201ENST00000384727 106 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AL359694.1-201ENST00000403247 604 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AL590635.1-201ENST00000406314 586 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 NPM1P36-201ENST00000415681 835 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AL929472.1-201ENST00000417484 429 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC091390.2-201ENST00000432573 374 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC013403.1-201ENST00000436954 263 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 CEACAMP5-201ENST00000448037 961 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 KF459542.1-201ENST00000450908 553 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 NACAP5-201ENST00000509863 636 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 OR52H2P-201ENST00000514607 902 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC004232.1-201ENST00000571388 208 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 MIR3157-201ENST00000578688 85 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 WBP1LP11-201ENST00000586141 328 ntBASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP1Q96SZ6 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms