Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 AC009120.3-201ENST00000563335 499 ntBASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 AL161912.3-201ENST00000605404 628 ntBASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 AC011815.2-201ENST00000618230 2021 ntBASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 MIR6849-201ENST00000618543 69 ntBASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 CLUHP10-201ENST00000631979 980 ntBASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC02495-203ENST00000636704 242 ntBASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF3IP1Q8TDR0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 RPL31P11-201ENST00000426558 1558 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AL121578.1-201ENST00000428051 892 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AL645939.3-201ENST00000435408 225 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AC009237.1-201ENST00000442127 744 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 RPL31P11-202ENST00000454082 372 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 RN7SL790P-201ENST00000474043 298 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 RN7SL165P-201ENST00000477476 291 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 OR9G2P-201ENST00000533326 880 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AC133552.4-201ENST00000576103 676 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AL137246.2-201ENST00000613439 662 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 MIR6883-201ENST00000614952 78 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AC091059.2-201ENST00000623355 614 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AC006600.2-201ENST00000624834 2506 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 AC020656.2-201ENST00000613291 5309 ntBASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
TRAF3IP1Q8TDR0 BIN2P1-201ENST00000504996 1530 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 FANCD2P2-201ENST00000437591 1400 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 RN7SKP161-201ENST00000411110 305 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 RNA5SP115-201ENST00000411160 107 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC116036.1-201ENST00000412199 367 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 RPS17P17-201ENST00000419392 409 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 HMGN1P32-201ENST00000441744 256 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 OR13K1P-201ENST00000444577 975 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC131935.1-201ENST00000524621 333 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AL121579.2-201ENST00000555466 590 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC027796.1-201ENST00000575593 512 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AL008723.3-201ENST00000608926 449 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 MIR6503-201ENST00000622884 86 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms