Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AL157831.2-201ENST00000564681 3095 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 RNA5SP355-201ENST00000365317 135 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AL139100.1-201ENST00000408001 498 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 CYCSP52-201ENST00000422857 310 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 HSFY1P1-201ENST00000423928 1178 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 RPL7AP14-201ENST00000424041 802 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AHCYP8-201ENST00000425108 209 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC244033.1-201ENST00000426826 870 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC097721.1-201ENST00000427150 1253 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 GAPDHP33-201ENST00000443168 1013 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 REG1CP-206ENST00000447469 496 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC009963.4-201ENST00000448535 339 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 MTND2P3-201ENST00000452458 470 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 MTND3P4-201ENST00000453537 303 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 CCNJP2-201ENST00000457810 1163 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC099340.1-201ENST00000475247 599 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC008868.1-201ENST00000509786 737 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC103855.4-201ENST00000533158 265 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 PPIAP14-201ENST00000577627 496 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC100832.2-201ENST00000582080 776 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC005229.3-201ENST00000603438 323 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 MRPL57P1-201ENST00000621486 265 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC020978.9-201ENST00000624380 1141 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AL138960.2-201ENST00000625145 535 ntBASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP4Q8N3C7 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.02□□□□□ -1.44
CLIP4Q8N3C7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.02□□□□□ -1.44
CLIP4Q8N3C7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.02□□□□□ -1.44
CLIP4Q8N3C7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.02□□□□□ -1.44
CLIP4Q8N3C7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC007998.4-201ENST00000612496 2533 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 RNA5SP382-201ENST00000363355 112 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 RN7SKP191-201ENST00000364713 306 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 MIR138-2-201ENST00000384916 84 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AL929472.1-201ENST00000417484 429 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 NME1P1-201ENST00000420914 382 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 MTND2P9-201ENST00000422293 931 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 ELOBP4-201ENST00000423418 296 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC021876.1-201ENST00000425959 359 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 RPL3P11-201ENST00000434028 1146 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AL356133.1-201ENST00000444762 372 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AL133480.2-201ENST00000456723 487 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 RPL5P14-201ENST00000494197 878 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC134698.1-201ENST00000511619 643 ntBASIC6.02□□□□□ -1.45
CLIP4Q8N3C7 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms