Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC005972.3-201ENST00000606304 481 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 SNORD16-201ENST00000362803 99 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 TMA16P2-201ENST00000413187 601 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 UBE2V1P14-201ENST00000415815 558 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AL022324.2-201ENST00000434827 780 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC128677.1-201ENST00000436016 442 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AP003385.3-201ENST00000472498 287 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 RN7SL413P-201ENST00000482700 297 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 OR9A1P-202ENST00000484361 945 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC139713.1-202ENST00000512366 460 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 RNA5SP116-201ENST00000516132 98 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 RPL3P13-201ENST00000550415 216 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC018558.5-201ENST00000565840 952 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 MIR3189-201ENST00000578735 73 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC024267.2-201ENST00000582737 417 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 SYPL1P2-201ENST00000582878 727 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 RPL21P136-201ENST00000605378 396 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AC016911.1-201ENST00000613297 452 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AL118508.4-201ENST00000624142 1176 ntBASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.3□□□□□ -1.4
ZNF549Q6P9A3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC116036.1-201ENST00000412199 367 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 RSL24D1P8-201ENST00000434442 492 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 PSMD8P1-201ENST00000436275 769 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 RPS27AP3-201ENST00000453803 454 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC103563.5-201ENST00000455643 364 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 RPS7P11-201ENST00000484240 586 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC114324.2-202ENST00000503812 134 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 RNU6-467P-201ENST00000517027 110 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 OR4A40P-201ENST00000533878 948 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms